Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4E7E2 Cluster: NADH dehydrogenase subunit 5, putative;...    34   1.7  
UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containi...    32   6.9  
UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, wh...    32   6.9  
UniRef50_A6X183 Cluster: DSBA oxidoreductase precursor; n=1; Och...    32   9.2  
UniRef50_Q9VGS7 Cluster: CG4772-PA; n=2; Sophophora|Rep: CG4772-...    32   9.2  

>UniRef50_Q4E7E2 Cluster: NADH dehydrogenase subunit 5, putative;
           n=1; Wolbachia endosymbiont of Drosophila simulans|Rep:
           NADH dehydrogenase subunit 5, putative - Wolbachia
           endosymbiont of Drosophila simulans
          Length = 135

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -2

Query: 406 YIYSLS*FKLFILIRATLQCALS*LSSRSYK*NFWFLFQIVSIYIKYGCFCTIVFCSAAC 227
           + Y LS F  F ++  T  C  S +   SY     FLF I  I+  + C C+I+FC+  C
Sbjct: 2   FCYFLSCFFSFSILFCTFSCLFSIIFCTSY-----FLFSI--IFCTFYCPCSIIFCTFYC 54


>UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containing
            protein; n=1; Tetrahymena thermophila SB210|Rep: DHHC
            zinc finger domain containing protein - Tetrahymena
            thermophila SB210
          Length = 4579

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -2

Query: 412  VNYIYSLS*FKLFILIRAT-LQCALS*LSSRSYK*NFWFLFQIVSIYIKYG 263
            V Y+Y+ S F  ++  +A  +QC L  + S++YK    F+FQ+   Y KYG
Sbjct: 1600 VEYVYAPSRFNYYLYDQALCIQCELGYVVSKNYKQCIHFIFQL--SYPKYG 1648


>UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_61,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 927

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +3

Query: 150 CRYKIELIMRLNYINAQTLDASPKFPQAAEQNTIVQKQPYLIYIETI*NRNQKF---HLY 320
           C Y++ +  ++ ++ +  L  SPK  Q  +QNT+ Q Q  L+Y   + + N K     LY
Sbjct: 214 CSYEVRIRSKMLFLISLVLIDSPK--QLQQQNTVQQNQNTLVYKLNVIDFNNKIIKAGLY 271

Query: 321 DLL 329
           D+L
Sbjct: 272 DVL 274


>UniRef50_A6X183 Cluster: DSBA oxidoreductase precursor; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: DSBA
           oxidoreductase precursor - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 268

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +2

Query: 218 EVPASS*AEHNCTETTVFNIYRNYLKQKPEISLV*SAAKLTKGA 349
           E PA+S A     +  + N+ RNYL Q PE+ L   +A  TK A
Sbjct: 36  ESPAASAAPAAMNQQAIENVVRNYLIQNPELMLEVQSALETKQA 79


>UniRef50_Q9VGS7 Cluster: CG4772-PA; n=2; Sophophora|Rep: CG4772-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 526

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 408 IIFILCHNLNYLY*FAQHFNAPLVSLAA 325
           II    HN + LY F+QHFNAPL+ +AA
Sbjct: 138 IILEASHN-DALYGFSQHFNAPLLGVAA 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,375,140
Number of Sequences: 1657284
Number of extensions: 7099336
Number of successful extensions: 12662
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12660
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)