Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.41 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   0.94 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -2

Query: 139 IKLILNQLNIHTRIRRACEINYFFVIFFKMLL*FKIVYQRYKVY 8
           + LI+N  N  TR R    + Y FV  + +   F    Q YK Y
Sbjct: 119 VSLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYY 162


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
          growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 51 CYYNSK*YIKD 19
          CYYNSK Y +D
Sbjct: 23 CYYNSKAYFRD 33


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = -2

Query: 304 WFLFQIVSIYIKYGCFC 254
           W++   + + I  GC C
Sbjct: 40  WYICYTIGVIITIGCLC 56


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 432 CDLEITVSPKPV 467
           CDL++T +P P+
Sbjct: 53  CDLDVTGTPPPL 64


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 60  FLKCYYNSK 34
           F  CYYNSK
Sbjct: 272 FCYCYYNSK 280


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 372 INNLNYDKE*I*FTY*RWLVCDLEIT 449
           +N+LN + E + FT+  W V    +T
Sbjct: 43  LNHLNEEPEKLHFTFKSWKVLYTSLT 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,108
Number of Sequences: 336
Number of extensions: 2162
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)