Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    31   0.008
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   2.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 0.008
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 324 APNLWPIENHSX-LRNILVVYNMAQTIFSAWI 416
           A  +W +EN +  L  I VV++ A T FSAWI
Sbjct: 19  ALTVWHVENPTYRLYKIFVVFSFAVTFFSAWI 50


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 301 RILREGAWPQTYGQSKTIPNF 363
           R+++EG+   TY   K  PNF
Sbjct: 491 RMMKEGSMMVTYQAQKGHPNF 511


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 112 FFVCYVSVLFNPY 150
           FF+ YVS+L  P+
Sbjct: 291 FFIVYVSLLLGPH 303


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 204 QLETVAIFVSYHQLLGDNI 148
           Q E    FV YH++LG+ +
Sbjct: 346 QDEKFESFVYYHRILGETV 364


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 507 PHGHWTPRVIYQLTPKSHSGP 445
           PH +  P  I Q TP S  GP
Sbjct: 282 PHVYNPPDHIQQATPYSAPGP 302


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 206 YSDLMDSRGDPRVKDWPMMSSPWP 277
           +SD + SRG      WP+  S  P
Sbjct: 556 FSDRLKSRGIRTAAIWPLWCSQNP 579


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 369 ILVVYNMAQTIFS 407
           ILV +N  QTIFS
Sbjct: 227 ILVTHNEIQTIFS 239


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 369 ILVVYNMAQTIFS 407
           ILV +N  QTIFS
Sbjct: 52  ILVTHNEIQTIFS 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,766
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)