Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    24   3.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.6  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    23   6.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   8.2  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 194 VSSWYSDLMDSRGDPRVKDWPMMSSPWP 277
           VSSW+S+ +D+R +  V+ +P   S  P
Sbjct: 154 VSSWWSEYLDARPE-HVRKYPSSYSGKP 180


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 373 RIFRSXEWFSIGHKF 329
           R+    EW S GHKF
Sbjct: 449 RVLVEREWLSFGHKF 463


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 373 RIFRSXEWFSIGHKF 329
           R+    EW S GHKF
Sbjct: 449 RVLVEREWLSFGHKF 463


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 194 VSSWYSDLMDSRGDPRVKDWP 256
           VSSW+S+ +D+R +  V+ +P
Sbjct: 154 VSSWWSEYLDARPE-HVRKYP 173


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 83  KLIWKGPAVLSSF 121
           K++WK PA+  SF
Sbjct: 135 KVVWKPPAIYKSF 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,573
Number of Sequences: 2352
Number of extensions: 10744
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)