Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H03f
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   6.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 223 CKFFSIQNYVRLT 261
           CKFFSI N + L+
Sbjct: 410 CKFFSIDNALLLS 422



 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 223 CKFFSIQN 246
           CKFFSI N
Sbjct: 357 CKFFSIDN 364


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 13  SSSLASWPSPRLSPASF 63
           +SSL + PSP  SP ++
Sbjct: 261 TSSLITTPSPSASPLAY 277


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 10 CSSSLASWPSP 42
          CS + A WP P
Sbjct: 57 CSEAAALWPKP 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,330
Number of Sequences: 336
Number of extensions: 500
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)