Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    28   0.17 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   2.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   3.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.6  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 414  STLANDTNTSENKLRDHNHDSRNRTGRKKS 503
            ST++N+TN+S +  +  +H   N + RKK+
Sbjct: 961  STISNNTNSSSSSGKKSSHSGTNSSKRKKT 990


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 333 YH*QQHPPVHNEAYHNQYQLNQH 401
           YH QQHP  H++ +H+ +  + H
Sbjct: 172 YHQQQHPG-HSQHHHHHHHHHPH 193


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 342 QQHPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRNRT 488
           QQH   H+  +H+    N H +  +T  +    S +       D+R+RT
Sbjct: 651 QQHQHHHHHHHHHHQNPNDHFV--NTNTDTIKRSHSAQLPQREDARSRT 697


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 342  QQHPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRNRT 488
            Q  PP    A     Q  +H + S+ + +  ++S +   D N D+++R+
Sbjct: 940  QPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSSSTADRNGDTKSRS 988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,824
Number of Sequences: 2352
Number of extensions: 8167
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)