Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028847-1|ABI34228.1|  353|Drosophila melanogaster RT01114p pro...    31   0.95 
AE014297-509|AAF54087.1|  353|Drosophila melanogaster CG1046-PA ...    31   0.95 
AE001572-10|AAD19800.1|  353|Drosophila melanogaster DNA-binding...    31   0.95 
Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor pr...    28   8.8  
AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p pro...    28   8.8  
AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA...    28   8.8  
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    28   8.8  

>BT028847-1|ABI34228.1|  353|Drosophila melanogaster RT01114p
           protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDS-RNRTGRKKSCF 509
           PP +N+   N   LN HC          ++ EN     NHDS R +  R ++ F
Sbjct: 44  PPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAF 97


>AE014297-509|AAF54087.1|  353|Drosophila melanogaster CG1046-PA
           protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDS-RNRTGRKKSCF 509
           PP +N+   N   LN HC          ++ EN     NHDS R +  R ++ F
Sbjct: 44  PPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAF 97


>AE001572-10|AAD19800.1|  353|Drosophila melanogaster
           DNA-binding-protein,transcription-factor protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDS-RNRTGRKKSCF 509
           PP +N+   N   LN HC          ++ EN     NHDS R +  R ++ F
Sbjct: 44  PPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAF 97


>Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor
           protein.
          Length = 949

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 348 HPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRN 482
           H  +H + +H+Q QL+ H      L +     + + + H+H + +
Sbjct: 89  HEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNS 133


>AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p
           protein.
          Length = 950

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 348 HPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRN 482
           H  +H + +H+Q QL+ H      L +     + + + H+H + +
Sbjct: 89  HEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNS 133


>AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA,
           isoform A protein.
          Length = 1264

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 348 HPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRN 482
           H  +H + +H+Q QL+ H      L +     + + + H+H + +
Sbjct: 403 HEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNS 447


>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 348 HPPVHNEAYHNQYQLNQHCL*SSTLANDTNTSENKLRDHNHDSRN 482
           H  +H + +H+Q QL+ H      L +     + + + H+H + +
Sbjct: 403 HEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNS 447


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,493,270
Number of Sequences: 53049
Number of extensions: 321162
Number of successful extensions: 672
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)