Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.054
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   4.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 0.054
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 9   FEHKFNLDRQMMSHDEDWPEADSNVDIESISEPQLKRLQ 125
           F HK NL R M  HD   PE+  + ++E++ E + K++Q
Sbjct: 429 FRHKGNLIRHMAMHD---PESTVSKEMEALREGRQKKVQ 464


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
 Frame = +1

Query: 121 CSRYCG--WSSRRYSTSTRCPSRRGSHPKRSGRKRAPCSACP*RRWS 255
           C + CG  W  R  S+    PS  G+H     R        P  RW+
Sbjct: 207 CRKTCGTGWKYRSISSLHAPPSHPGAHRAAEPRLDWRIKILPLPRWN 253


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 136 GWSSRRYSTSTRCPSRRGSHPKRSGR 213
           G  SRR+ T +    RR  HP R+GR
Sbjct: 112 GEPSRRW-TRSGATGRRQPHPYRAGR 136


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 136 GWSSRRYSTSTRCPSRRGSHPKRSGR 213
           G  SRR+ T +    RR  HP R+GR
Sbjct: 112 GEPSRRW-TRSGATGRRQPHPYRAGR 136


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 6/31 (19%), Positives = 17/31 (54%)
 Frame = +3

Query: 375  QKVSELSQLIERQWYEDRGAVEAAVSLAKGH 467
            +   +++  ++R W E+R  +  + +L+  H
Sbjct: 1022 EAAKQITSALQRDWNEERARLAVSSTLSPSH 1052


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,141
Number of Sequences: 2352
Number of extensions: 6807
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)