Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   290   7e-79
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   290   7e-79
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   290   7e-79
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   290   7e-79
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   287   5e-78
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    32   0.54 
AE014297-3432|AAF56219.2|  267|Drosophila melanogaster CG33108-P...    29   3.8  
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    29   5.1  
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro...    29   5.1  
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,...    29   5.1  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    29   5.1  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  290 bits (712), Expect = 7e-79
 Identities = 138/172 (80%), Positives = 147/172 (85%)
 Frame = +1

Query: 1   SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 180
           SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR R
Sbjct: 8   SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 67

Query: 181 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 360
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 68  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 127

Query: 361 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTXMLSDQAEARRNKVKEARKRRE 516
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+ ML+DQAEARR KV+EARKRRE
Sbjct: 128 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRRE 179


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  290 bits (712), Expect = 7e-79
 Identities = 138/172 (80%), Positives = 147/172 (85%)
 Frame = +1

Query: 1   SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 180
           SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR R
Sbjct: 21  SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 80

Query: 181 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 360
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 81  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 140

Query: 361 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTXMLSDQAEARRNKVKEARKRRE 516
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+ ML+DQAEARR KV+EARKRRE
Sbjct: 141 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRRE 192


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  290 bits (712), Expect = 7e-79
 Identities = 138/172 (80%), Positives = 147/172 (85%)
 Frame = +1

Query: 1   SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 180
           SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR R
Sbjct: 3   SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 62

Query: 181 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 360
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 122

Query: 361 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTXMLSDQAEARRNKVKEARKRRE 516
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+ ML+DQAEARR KV+EARKRRE
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRRE 174


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  290 bits (712), Expect = 7e-79
 Identities = 138/172 (80%), Positives = 147/172 (85%)
 Frame = +1

Query: 1   SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 180
           SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR R
Sbjct: 3   SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 62

Query: 181 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 360
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 122

Query: 361 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTXMLSDQAEARRNKVKEARKRRE 516
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+ ML+DQAEARR KV+EARKRRE
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRRE 174


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  287 bits (705), Expect = 5e-78
 Identities = 137/172 (79%), Positives = 146/172 (84%)
 Frame = +1

Query: 1   SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 180
           SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR R
Sbjct: 3   SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 62

Query: 181 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 360
           VRKNTEARRK RHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHD 122

Query: 361 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTXMLSDQAEARRNKVKEARKRRE 516
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+ ML+DQAEARR KV+EARKRRE
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRRE 174


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 416  YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRALAV 243
            YS++   +L  L        +YR    FL   +++ NF  TLC C +S FCG  A  V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376


>AE014297-3432|AAF56219.2|  267|Drosophila melanogaster CG33108-PA
           protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
 Frame = -2

Query: 385 HYPSPS-CRVS-GIDACQSSWQFCTSGAIFLKPFV----FVPIVPSVAYAHWLYLFSYQS 224
           H P P+ C++  G   C+   +   +G   L P+       P V +   AHW  +  Y  
Sbjct: 128 HMPGPAACQLHVGPLDCKKVKELLKAGGCLLVPYDADVNHAPCVKNGHRAHWALIVGYLV 187

Query: 223 HSDDPFYVL 197
            + D FYVL
Sbjct: 188 DTQDRFYVL 196


>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
           dynein heavy chian protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 82  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 183
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
           protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 82  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 183
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
           isoform B protein.
          Length = 3388

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 82  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 183
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
           isoform A protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 82  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 183
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,978,893
Number of Sequences: 53049
Number of extensions: 513548
Number of successful extensions: 1705
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)