Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G09f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3ELH0 Cluster: Transporter, drug/metabolite exporter f...    36   0.74 
UniRef50_Q4XUF6 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q4U9U1 Cluster: Condensin subunit, putative; n=2; Theil...    33   3.0  
UniRef50_Q1RL55 Cluster: Zinc finger protein; n=6; Chordata|Rep:...    33   5.2  
UniRef50_A2SU68 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q3ELH0 Cluster: Transporter, drug/metabolite exporter
           family; n=8; Bacillus cereus group|Rep: Transporter,
           drug/metabolite exporter family - Bacillus thuringiensis
           serovar israelensis ATCC 35646
          Length = 303

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = -1

Query: 215 TKIFYYLCFSYQRGSIICFMIYSYFWTVILIA*IIPTVLMSRKKVILCI*NLLFTTYIPN 36
           T IFYY        SI   +++ + W  I+I  +    L SR+KVI  I  LL  T++ +
Sbjct: 77  TGIFYYASLKTVPASIAIILLFQFVWVGIIIEAVATKTLPSREKVISVI-FLLVGTFLSS 135

Query: 35  NL 30
            L
Sbjct: 136 GL 137


>UniRef50_Q4XUF6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium chabaudi|Rep: Putative uncharacterized protein
            - Plasmodium chabaudi
          Length = 1071

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = -3

Query: 390  IFISLFNLNHNFSKRKRVQKYFVFIQKQSLRALI**T-LNFLFKRSK*KWRTEMY*TYLN 214
            I IS F  N+N   +KR +++ ++ Q +++R L   T        S+    +  Y +  N
Sbjct: 901  ICISYFFKNNNIHIKKRKEEFIIYTQLKNVRNLSKSTNSQNSITNSEQSNTSSPYVSNTN 960

Query: 213  KNILLSVL*LPKR*YNLFYDLFIFLD--GYTYCIDYTYCLNVKKKSYIMYIKSTF 55
            KNI++      ++ YN+ Y++  FL   G+   +D    ++ K KS  + I S F
Sbjct: 961  KNIII------EKFYNILYNMNYFLKEYGFNTNVDVKGQISEKVKSVFLQITSVF 1009


>UniRef50_Q4U9U1 Cluster: Condensin subunit, putative; n=2;
           Theileria|Rep: Condensin subunit, putative - Theileria
           annulata
          Length = 1724

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = -3

Query: 450 TLPFILFKNNSFGCRKLSPEIFISLFNLNHNFSKRKR 340
           TL  I FKN     + L+PE+FIS+FNLN  +S  ++
Sbjct: 56  TLGEINFKNVGECLKILTPEVFISVFNLNRIYSNLEK 92


>UniRef50_Q1RL55 Cluster: Zinc finger protein; n=6; Chordata|Rep:
           Zinc finger protein - Ciona intestinalis (Transparent
           sea squirt)
          Length = 672

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 346 ETRPKIFCFHSKTITSCINLINIKFSIQTIE-VKMAHRNVLNLFKQ 212
           E R +  CFH +  T+C NL++ + S+ T + V   HR V+ +  Q
Sbjct: 575 ENRHQSSCFHIRCETTCNNLVSSRGSLYTADSVPPLHRQVIMILSQ 620


>UniRef50_A2SU68 Cluster: Putative uncharacterized protein; n=1;
           Methanocorpusculum labreanum Z|Rep: Putative
           uncharacterized protein - Methanocorpusculum labreanum
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 321

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 209 IFYYLCFSYQRGSIICFMIYSYFWTVILIA*IIPTVLMSRKKVILCI 69
           + Y+L   Y   S+   +++ Y W  ++I  +    L SR KVI C+
Sbjct: 100 VCYFLSLGYLPISLAVVLLFQYSWIGVVIEAVTRRKLPSRNKVIACL 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,176,218
Number of Sequences: 1657284
Number of extensions: 8016645
Number of successful extensions: 18288
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18278
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)