Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G06f
         (459 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6Q930 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q4N760 Cluster: Putative uncharacterized protein; n=2; ...    33   3.9  
UniRef50_Q6CIN5 Cluster: Similarities with sgd|S0004044 Saccharo...    31   9.0  

>UniRef50_A6Q930 Cluster: Putative uncharacterized protein; n=1;
           Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
           protein - Sulfurovum sp. (strain NBC37-1)
          Length = 305

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -3

Query: 307 YXILDESYFISLCIIIRYLLYTPLLSIAYCLS*KLKQLRNTIDYDCGGL 161
           Y I D + FI L I+   LL+ PLL+I   ++  +  +++T+ YD   L
Sbjct: 202 YTIKDSAIFIGLSILAFPLLFVPLLNIFIQIALWIWLIKDTMGYDAAAL 250


>UniRef50_Q4N760 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 473

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 4   SYYFTRSAFKFKCTCKNKLYYNHSKLCFKICSPADLCERILTV*KLN*NT 153
           ++ F  +  K  C+C++  + N  K CF+ CS  D C   L V K   NT
Sbjct: 110 AFCFNAADDKCVCSCQSGFFGNPYKECFQHCSTNDDCSSPLAVCKSTTNT 159


>UniRef50_Q6CIN5 Cluster: Similarities with sgd|S0004044
           Saccharomyces cerevisiae YLR054c hypothetical protein;
           n=1; Kluyveromyces lactis|Rep: Similarities with
           sgd|S0004044 Saccharomyces cerevisiae YLR054c
           hypothetical protein - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 659

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 271 CIIIRYLLYTPLLSIAYCLS*KLKQLRNTID-YDCGGLKLMYFSSVF 134
           C+ I Y  Y     IAY  S   +Q  N  D YDCG   L + SS++
Sbjct: 310 CLTINYEAYCFYNEIAYPSSLLFEQCINLADKYDCGSSNLTFLSSLY 356


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,651,206
Number of Sequences: 1657284
Number of extensions: 5137501
Number of successful extensions: 9752
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9746
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)