Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G06f
         (459 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0212 + 42018162-42018266,42018371-42018489,42019392-42019905     27   7.3  
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320     27   9.6  

>01_07_0212 + 42018162-42018266,42018371-42018489,42019392-42019905
          Length = 245

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 313 HTYXILDESYFISLCIIIRYLLYTPLLSIAYCLS*KLKQLRNTIDYDCG 167
           H Y I D  +  S+C+++R   + PL+  A+  +   ++L +   YD G
Sbjct: 72  HAYCIHDYMFEESVCLLLRATWFEPLIVEAHEEALDEEELYHIYQYDDG 120


>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
          Length = 463

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 31  KFKCTCKNKLYYNHSKLCFKICSPADL 111
           K  C C N L    SK C  + +PADL
Sbjct: 434 KSTCNCSNCLRNADSKTCEPLLAPADL 460


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,616,965
Number of Sequences: 37544
Number of extensions: 130577
Number of successful extensions: 178
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)