BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305G06f (459 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 27 0.097 DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 2.1 DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.1 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 3.7 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 6.4 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 6.4 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.4 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.4 >S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating peptide protein. Length = 50 Score = 27.1 bits (57), Expect = 0.097 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 Query: 1 VSYYFTRSAFKFKCTCKNKLYYNHSKLCFKIC 96 ++ YF KC CK + H +C KIC Sbjct: 17 ITSYFVTPTMSIKCNCKRHVIKPH--ICRKIC 46 >DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant 2 precursor protein. Length = 94 Score = 22.6 bits (46), Expect = 2.1 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1 Query: 79 LCFKICSPADLC 114 LC KIC+P +C Sbjct: 62 LCIKICAPGCVC 73 >DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant 1 precursor protein. Length = 92 Score = 22.6 bits (46), Expect = 2.1 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1 Query: 79 LCFKICSPADLC 114 LC KIC+P +C Sbjct: 62 LCIKICAPGCVC 73 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 21.8 bits (44), Expect = 3.7 Identities = 9/29 (31%), Positives = 17/29 (58%) Frame = +2 Query: 83 VSKSALLPICVNASLQFKN*TEIHQLQST 169 ++K A + + +QF+N E+HQ +T Sbjct: 84 MAKHAAAELALRNIVQFRNTPEVHQAINT 112 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 104 HNYNKLYYNI 113 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 337 HNYNKLYYNI 346 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.0 bits (42), Expect = 6.4 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +1 Query: 169 HNHNQLYFSI 198 HN+N+LY++I Sbjct: 337 HNYNKLYYNI 346 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 98,869 Number of Sequences: 438 Number of extensions: 1872 Number of successful extensions: 15 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12189771 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -