Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G05f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1IIX0 Cluster: Multicopper oxidase, type 2 precursor; ...    34   2.3  
UniRef50_Q7RFU0 Cluster: 235 kDa rhoptry protein; n=3; Plasmodiu...    32   6.9  
UniRef50_A2EKB8 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q1IIX0 Cluster: Multicopper oxidase, type 2 precursor;
           n=2; Acidobacteria bacterium Ellin345|Rep: Multicopper
           oxidase, type 2 precursor - Acidobacteria bacterium
           (strain Ellin345)
          Length = 596

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 513 IFHIKNELCDFHKNFMVFLTYFTATIFKRSRDVCATLCLSPTTTTYHFMSLYV 355
           + H+KNEL D          +    + K S+D C++  +SP  T  HF  L +
Sbjct: 90  VLHLKNELVDLEGTPSAHAAHAREAVTK-SKDPCSSAIMSPIATNLHFHGLTI 141


>UniRef50_Q7RFU0 Cluster: 235 kDa rhoptry protein; n=3; Plasmodium
           (Vinckeia)|Rep: 235 kDa rhoptry protein - Plasmodium
           yoelii yoelii
          Length = 807

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
 Frame = +2

Query: 11  IAYYVNIFFQ*YPIDLFVLARYTLN-----ITGCYDYRFLRLNMSSPFNVVITDFDCINN 175
           I  + NI  + Y ++LF L  Y+++     I   + ++ L + + +  N + TD D IN+
Sbjct: 733 IPLFSNIINEEYELNLFQLMNYSIDFLNNQICNFFSHKLLPIILENNLNKIYTDLDLINH 792

Query: 176 Y 178
           Y
Sbjct: 793 Y 793


>UniRef50_A2EKB8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 685

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -2

Query: 454 IFYSHNF*KIQRCVCHFMSITYHYHL 377
           +FY+ +F K QRC+  F+ + ++YH+
Sbjct: 658 LFYNFDFHKDQRCIISFLILAFYYHV 683


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,971,891
Number of Sequences: 1657284
Number of extensions: 9084639
Number of successful extensions: 15034
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15029
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)