Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G05f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S52227-1|AAB24821.1| 1152|Homo sapiens leukocyte integrin alpha ...    30   4.3  
M18044-1|AAA59491.1| 1152|Homo sapiens LYAM1 protein.                  30   4.3  
J04145-1|AAA59903.1| 1145|Homo sapiens ITGAM protein.                  30   4.3  
J03925-1|AAA59544.1| 1153|Homo sapiens ITGAM protein.                  30   4.3  
BC099660-1|AAH99660.1| 1152|Homo sapiens integrin, alpha M (comp...    30   4.3  
BC096348-1|AAH96348.1| 1152|Homo sapiens integrin, alpha M (comp...    30   4.3  
BC096346-1|AAH96346.1| 1152|Homo sapiens integrin, alpha M (comp...    30   4.3  
BC096347-1|AAH96347.1| 1152|Homo sapiens integrin, alpha M (comp...    29   9.9  
AK025511-1|BAB15157.1|  132|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>S52227-1|AAB24821.1| 1152|Homo sapiens leukocyte integrin alpha
           chain protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 883


>M18044-1|AAA59491.1| 1152|Homo sapiens LYAM1 protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 883


>J04145-1|AAA59903.1| 1145|Homo sapiens ITGAM protein.
          Length = 1145

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 844 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 876


>J03925-1|AAA59544.1| 1153|Homo sapiens ITGAM protein.
          Length = 1153

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 852 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 884


>BC099660-1|AAH99660.1| 1152|Homo sapiens integrin, alpha M
           (complement component 3 receptor 3 subunit) protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 883


>BC096348-1|AAH96348.1| 1152|Homo sapiens integrin, alpha M
           (complement component 3 receptor 3 subunit) protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 883


>BC096346-1|AAH96346.1| 1152|Homo sapiens integrin, alpha M
           (complement component 3 receptor 3 subunit) protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG+ K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGALKSTSCSI---NHPIFPENSEVTFNITF 883


>BC096347-1|AAH96347.1| 1152|Homo sapiens integrin, alpha M
           (complement component 3 receptor 3 subunit) protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 406 SGTHISGSFKNCGCKICQKNHEVFMEVTKFIFNVKY 513
           S T +SG  K+  C I   NH +F E ++  FN+ +
Sbjct: 851 SSTEVSGVLKSTSCSI---NHPIFPENSEVTFNITF 883


>AK025511-1|BAB15157.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21858 fis, clone HEP02301. ).
          Length = 132

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 22  CKYIFPI--IPYRFVCTCTIHIKHHRLLR 102
           CK++ P   +P+ + CTCT H    RLL+
Sbjct: 103 CKHMSPTRELPHMYTCTCTHHKHMRRLLQ 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,439,079
Number of Sequences: 237096
Number of extensions: 1408799
Number of successful extensions: 1460
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)