Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305G01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.31 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   5.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 296 GNPPDWRALDTLKKHNVPYNNHARQITSEDFDYYDYI 406
           GNP +W    T++K   PY+        ++F +  Y+
Sbjct: 232 GNPLEWTGQVTVRKKRKPYSKFQTLELEKEFLFNAYV 268


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 1   LL*VNG*SIMEIKLSAIQN*RVPTKLKY 84
           +L +NG      K+SAI+N  VP K K+
Sbjct: 507 ILTINGIKADPEKISAIRNFPVPQKTKH 534


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 410 GMDESNMKDLNKKAPKGSKAKLL 478
           G+D   +KDL +K P  +  KL+
Sbjct: 31  GLDTEEIKDLLQKYPPIANCKLV 53


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 144 IFNASLIDDSR*FPSITKELVF*FCRYSLILYCA 43
           I N+ +    + F SIT+ L+  F  Y + L C+
Sbjct: 371 IGNSDIAITGKNFFSITRGLILSFVDYFVFLLCS 404


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 141 KWSTTRKRHYLFVSVIYVG 197
           +W  T+K  YL+   ++VG
Sbjct: 306 EWDDTQKVPYLYDDTLWVG 324


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 265 DIPMFTQIHVIYGFLENSLSNW 200
           D+P+    H++Y F+  + ++W
Sbjct: 45  DLPVDLCTHIVYSFIGVNDADW 66


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 275 AIGGWHVGN 301
           +IGGW+ GN
Sbjct: 101 SIGGWNAGN 109


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 275 AIGGWHVGNPP 307
           AIGGW  G+ P
Sbjct: 595 AIGGWAFGSTP 605


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 275 AIGGWHVGN 301
           +IGGW+ GN
Sbjct: 101 SIGGWNAGN 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,740
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)