Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 126 2e-30
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 103 2e-23
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 78 9e-16
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 69 3e-13
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 67 2e-12
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 0.97
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 1.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 3.0
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.9
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 3.9
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 5.2
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 25 5.2
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 25 6.8
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 6.8
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 9.0
SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces ... 25 9.0
SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner mem... 25 9.0
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 126 bits (304), Expect = 2e-30
Identities = 62/154 (40%), Positives = 86/154 (55%)
Frame = +3
Query: 51 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 230
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 231 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAG 410
+PWR ++QRG YLA +ETLD GK + + +V +A RYY G
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGG 136
Query: 411 KADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
ADK G TI +D + +T EP+GVCGQIIPW
Sbjct: 137 WADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPW 170
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 103 bits (246), Expect = 2e-23
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
Frame = +3
Query: 75 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDA 254
L+IN EW S +T+ T++P E VI +V + +ID AV +AK+AF W+ +
Sbjct: 23 LYINGEWHK--SAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAF---KTWKKVPG 77
Query: 255 SQRGXXXXXXXXXXXSQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILG 431
S++G + LA +E +D GKP V + +V + ++LRY AG ADKI G
Sbjct: 78 SEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYG 137
Query: 432 NTIPSDGEVLTFTMKEPVGVCGQIIPW 512
IP+ E L + + P+GVCGQI+PW
Sbjct: 138 QVIPTGPEKLAYAKRTPIGVCGQIVPW 164
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 77.8 bits (183), Expect = 9e-16
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 57 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSP 236
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTY-- 71
Query: 237 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKA 416
+ QR L ++ TL+ GKP+ Q+E EV + L++YA +A
Sbjct: 72 -KNFTHVQRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEA 130
Query: 417 DKILGNTIPSDGEVLTF--TMKEPVGVCGQIIPW 512
+ G+ PS + F ++K+PVGV I PW
Sbjct: 131 VRTFGDVAPSSLQSQNFLISIKQPVGVSALITPW 164
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 69.3 bits (162), Expect = 3e-13
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Frame = +3
Query: 78 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDAS 257
+I +WV A S KTF NP + V + + A+ A +AF Y R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSY---RNSDIK 83
Query: 258 QRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILG-N 434
+R + LA + TL+ GK + ++ EV ++A + ++AG+A +I G +
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDS 143
Query: 435 TIPSDGEVLTFTMKEPVGVCGQIIPW 512
++ S+ + T+K+PVGV G I PW
Sbjct: 144 SMSSNPQNRIITIKQPVGVVGIITPW 169
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 66.9 bits (156), Expect = 2e-12
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Frame = +3
Query: 75 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTM 248
LFI+ ++V + + K P INP E +I A D+D AV A F R W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 249 DASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKAD--- 419
QRG + LA ++T++CGKP + ++ A + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 420 KILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
+ +P++ F + P GV G I PW
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPW 172
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 78 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 185
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 205 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 53
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 3.0
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Frame = -2
Query: 490 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 311
+P+ S + +S F + +S+ + STL +SSS P S SS +
Sbjct: 349 SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSR-----PASS-SSHSSS 402
Query: 310 LDWDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAATAKSISA---LSPSATCVMTVSS 140
L SS+S S+ P A R ++ ++ + S+S+ L+ S++ ++T SS
Sbjct: 403 LSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSS 462
Query: 139 CGLMVGKVFLLTASTHSLLINSLVYLTSTFTMLMIFLLIQSLSVST 2
V+++T T S S Y S T I L+I S ST
Sbjct: 463 HTYERSTVYVVTVETVS--SGSSTY-ASQSTQTSILLVIVGDSSST 505
Score = 25.8 bits (54), Expect = 3.9
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -2
Query: 490 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 311
+PT S + +S S F + LS+ S+ + TSSS + S SSS
Sbjct: 299 SPT-STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Query: 310 LDWDSRSSASLSN 272
S+SS+S S+
Sbjct: 358 TTSSSKSSSSFSS 370
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 457 TSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARYLDWDSRSSASL 278
TS S + + S+ P ST++ +SSS + S +SSS+ + + SS+++
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 277 SN 272
S+
Sbjct: 344 SS 345
Score = 25.0 bits (52), Expect = 6.8
Identities = 30/139 (21%), Positives = 55/139 (39%)
Frame = -2
Query: 490 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 311
T + +F TS S + + + + + S+ + TSSS + P + SSS+
Sbjct: 192 TSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
Query: 310 LDWDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAATAKSISALSPSATCVMTVSSCGL 131
S SS+S ++ + + + ++T S S+ S S T + S
Sbjct: 252 SSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Query: 130 MVGKVFLLTASTHSLLINS 74
F T S+ S+ +S
Sbjct: 312 SSSSSFSSTLSSSSMSSSS 330
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 SIPPLFPMAYHGRFSTR-PPIA*ASRTSRIPI*IP 316
S PP P A GR + PP+ ASRTS P+ P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -2
Query: 376 YTSSSDCFTGFPQSKVSSSARYLD-WDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAA 200
++S ++ TG+ + SS+ +S S S + P + + WN+ +AA
Sbjct: 115 FSSLANSVTGYASNYTQSSSNSTSTMNSTGSVSGGSVYP---TNSTTNSSISWNSSTSAA 171
Query: 199 TAKSISALSPSATCVMTVSS 140
T S S+ S S + V++V+S
Sbjct: 172 TNTSSSSSSSSQSSVVSVNS 191
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 356 TIRRRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSDN 505
T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++ D+
Sbjct: 543 TVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAYCDS 595
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 343 PQSKVSSSARYLDWDSRSSASLSNRRPR*EASMVRHGE*RWNAFFAAATAKSISALSPSA 164
PQ K + + + + + S++ S P EA++ + FA T ++LS S
Sbjct: 38 PQRKAKTPSNHATEELQQSSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISP 97
Query: 163 TCVMTVSS 140
T VSS
Sbjct: 98 TKSAAVSS 105
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 103 LSAKKPSLPSTHKMKQS*HRSLKEIRRILIWPSPQQRK 216
+ PS S ++ S HR LK+ R IL SP++++
Sbjct: 1 MDTSPPSYDSHFTLETSMHRQLKDKRIILASGSPRRKQ 38
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 81 INNEWVDAVSKKTFPTINPQDETVITQVAEGDKADI 188
+N EWVD + T + QD+ I+ + D +DI
Sbjct: 85 VNEEWVDIETDDTRNKDDDQDDDAISSI-HSDTSDI 119
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Frame = -2
Query: 358 CFTGFPQSKVSSSA----RYLDWDSRSS 287
CF G P S +SSA RYL W S S+
Sbjct: 13 CFVGLPASGKTSSAMKLSRYLTWMSVST 40
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 56 YFHHVDDIPFDPI 18
YF H+DD+P D I
Sbjct: 540 YFFHMDDVPLDNI 552
>SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 343
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 458 DFSV*RNGIS*YLVRFSSVISEHACGKVYFFFGLFYRFST 339
+F R I+ + F + +S+ K+Y FG Y FST
Sbjct: 209 EFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFST 248
>SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner
membrane translocase Oxa101|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -2
Query: 172 PSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTSTFTMLMIFLLI 23
P C++ + + GLM + + A+T S + NS + T F ++ L+
Sbjct: 205 PDPYCILPIINAGLMFSGMQMNRANTASTIGNSTNWRTFFFLCCLLSPLL 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,228,945
Number of Sequences: 5004
Number of extensions: 45378
Number of successful extensions: 142
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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