Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 134 5e-32
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 132 2e-31
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 129 2e-30
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 122 2e-28
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 108 2e-24
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 78 4e-15
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 77 1e-14
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 69 3e-12
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 52 2e-07
01_05_0543 + 23093519-23093624,23093912-23093934 35 0.034
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 33 0.18
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 31 0.56
02_04_0216 + 20986231-20988021 29 3.0
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 28 4.0
01_01_0135 + 1231687-1232188,1234489-1234564,1234646-1234743,123... 28 4.0
12_02_0102 - 13622123-13622500,13622838-13623107,13623196-13623555 28 5.2
09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247 28 5.2
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 28 5.2
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 27 6.9
06_01_0272 + 2016836-2017963 27 6.9
05_03_0483 + 14585581-14587977 27 6.9
08_02_0096 - 12296913-12296951,12297205-12297282,12297335-122973... 27 9.1
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 27 9.1
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 27 9.1
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 134 bits (323), Expect = 5e-32
Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 57 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSP 236
+++YTKLFIN +VDA S KTF T +P+ VI +VAEGDK D+DLAV AA++AF +
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFD-HGE 100
Query: 237 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEE-EVYFSASVLRYYAGK 413
W M S+RG + LA LE+LD GKP+ + +V +LRY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 414 ADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
ADKI G T+ ++ +T++EP+GV G I+PW
Sbjct: 161 ADKIHGETLKMSRQLQGYTLREPLGVAGLIVPW 193
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 132 bits (318), Expect = 2e-31
Identities = 72/154 (46%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Frame = +3
Query: 54 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 233
VDVKYTKL IN +VDA S KTF T++P+ VI +VAEGD D++ AVAAA++AF
Sbjct: 68 VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-G 126
Query: 234 PWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSE-EEVYFSASVLRYYAG 410
PW M A +R + +A LET D GK ++Q+ EV A +RYY G
Sbjct: 127 PWPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGG 186
Query: 411 KADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
ADKI G +P+DG + EP+GV GQIIPW
Sbjct: 187 WADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPW 220
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 129 bits (311), Expect = 2e-30
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Frame = +3
Query: 54 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 233
V V YT+L I+ ++VD+ S KTFPT++P+ +I VAEGD DI+ AV AA+KAF
Sbjct: 64 VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDE-G 122
Query: 234 PWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEE-EVYFSASVLRYYAG 410
PW M A +R + +A LET D GKP Q+ EV A ++RYYAG
Sbjct: 123 PWPKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAG 182
Query: 411 KADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
ADKI G +P+DG + EP+GV GQIIPW
Sbjct: 183 WADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPW 216
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 122 bits (293), Expect = 2e-28
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 MVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFH 224
+V ++K+TKLFIN E+VDA S KTF T +P+ V+ +AE DKAD+DLAV AA++AF
Sbjct: 19 LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAF- 77
Query: 225 RYSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSE-EEVYFSASVLRY 401
+ W M +R + LA L+ D GK + + ++ +A ++RY
Sbjct: 78 EHGKWPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRY 137
Query: 402 YAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
YAG ADKI G ++ G+ +T++EP+GV G IIPW
Sbjct: 138 YAGAADKIHGESLRVAGKYQGYTLREPIGVVGVIIPW 174
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 108 bits (260), Expect = 2e-24
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +3
Query: 48 VKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 227
++V V + +L + ++ + KTF T +P+ VI ++AEGDKADIDLAV AA++AF
Sbjct: 12 LQVFVSWKQLKVVDQRFRDLMGKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFD- 70
Query: 228 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSE-EEVYFSASVLRYY 404
+ PW M RG LA L+T+D GK + ++ A++LRYY
Sbjct: 71 HGPWPRMSGFARGRILHKFADLVEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYY 130
Query: 405 AGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
AG ADK+ G T+ +T+KEPVGV G I+PW
Sbjct: 131 AGAADKVHGETLKMARPCHGYTLKEPVGVVGHIVPW 166
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 78.2 bits (184), Expect = 4e-15
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Frame = +3
Query: 75 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS--PWRTM 248
LFI W + + P +NP E I + D++LAV+AA+ AF R W
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRA 71
Query: 249 DASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKIL 428
+ R + YLA LETLD GKP+ ++ ++ A+ YYA A+ +
Sbjct: 72 PGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALD 131
Query: 429 GN-----TIPSDGEVLTFTMKEPVGVCGQIIPW 512
G ++P + ++ +KEP+GV G I PW
Sbjct: 132 GKQRAPISLPME-NFESYVLKEPIGVVGLITPW 163
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 76.6 bits (180), Expect = 1e-14
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Frame = +3
Query: 72 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF--HRYSPWRT 245
+LF+ EW + P +NP E+ I ++ G D+D AVAAA++A +R W
Sbjct: 9 QLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDWAR 68
Query: 246 MDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKI 425
+ R + LA LETLDCGKP+ ++ ++ A Y+A A+ +
Sbjct: 69 APGAVRAKYLRAIAAKIIERKSELARLETLDCGKPLDEAAWDMDDVAGCFEYFADLAESL 128
Query: 426 -----LGNTIPSDGEVLTFTMKEPVGVCGQIIPW 512
++P + + KEP+GV G I PW
Sbjct: 129 DKRQNAPVSLPME-NFKCYLRKEPIGVVGLITPW 161
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 68.5 bits (160), Expect = 3e-12
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = +3
Query: 144 ETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDASQRGXXXXXXXXXXXSQSRYLAE 323
ET+ G K D A+A+A F YS W + A++R S LA
Sbjct: 108 ETLANVSCMGSKETSD-AIASAHSTF--YS-WSKLTANERSKALRKWHDLIISHKEELAL 163
Query: 324 LETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIP---SDGEVLTFTMKEPVGVC 494
L TL+ GKP+K++ EV + AS + Y+A +A +I G+ IP SD +L +K+PVGV
Sbjct: 164 LMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLL--VLKQPVGVV 221
Query: 495 GQIIPW 512
G + PW
Sbjct: 222 GAVTPW 227
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 52.4 bits (120), Expect = 2e-07
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 72 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMD 251
+L I E+V++ + + NP + V++++ + AV AA+ AF WR
Sbjct: 25 RLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAF---PGWRNTP 81
Query: 252 ASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILG 431
+ R + LAE T + GK +K + +V+ V+ + G +G
Sbjct: 82 VTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGTLQMG 141
Query: 432 NTIPS-DGEVLTFTMKEPVGVCGQIIPW 512
+ + + TF+++EP+GVC I P+
Sbjct: 142 EYVSNVSNGIDTFSIREPLGVCAGICPF 169
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 51 KVDVKYTKLFINNEWVDAVSKKT 119
K+++K+TKLFIN +VDAVS +T
Sbjct: 16 KLEIKFTKLFINGRFVDAVSDET 38
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/120 (20%), Positives = 45/120 (37%)
Frame = +3
Query: 72 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMD 251
+ + + EW + S K+ +NP +V + +++ + AK A W
Sbjct: 20 RYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVA---QKAWARTP 76
Query: 252 ASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILG 431
+R +AE + KP K + EV S ++ Y A + +ILG
Sbjct: 77 LWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILG 136
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 353 KTIRRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSD 502
K + R + K A+IL +G+ R H+ RRRS HH +C S+ S+
Sbjct: 250 KWVEERYLDDEKNAKILEVDTGKPGR--HASRRRSGSHHHHSSCSSMTSE 297
>02_04_0216 + 20986231-20988021
Length = 596
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 223 WNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINS 74
W A AAA A + +A + + V+ + + G V L A+ H+LL+ +
Sbjct: 9 WPAAAAAAPASAAAASAVTVEAVLALLERAISAGDVRRLGAAVHALLVKT 58
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 AKSISALSP-SATCVMTVSSCGLMVGKVFL 110
A S++ + P ATCV+T+S CG+ G L
Sbjct: 201 ANSVAIVPPLRATCVITMSHCGIGTGVAIL 230
>01_01_0135 +
1231687-1232188,1234489-1234564,1234646-1234743,
1234841-1235355
Length = 396
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 382 EKYTSSSDCFTGFPQSKVSSSARYLDWD 299
E Y S C + F S V+S RY++WD
Sbjct: 263 EGYFHSVVCNSDFRNSTVNSDMRYMEWD 290
>12_02_0102 - 13622123-13622500,13622838-13623107,13623196-13623555
Length = 335
Score = 27.9 bits (59), Expect = 5.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 453 EVLTFTMKEPVGVCGQIIPWI 515
E+ MKE +G C +++PW+
Sbjct: 258 EIWQMYMKEVIGSCSEVLPWL 278
>09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247
Length = 227
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 241 RHGE*RWNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVF 113
R G W F + KSIS SP V+ S CG +G F
Sbjct: 93 RGGRLGWTEFAYNSRHKSISVCSPEKKLVVPESVCGRPLGLQF 135
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 362 RRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVH 469
R IL RK ++ W+SG I Y + PY H
Sbjct: 199 RTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFH 234
>11_06_0349 +
22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 400 YLSTLAEKYTSSSDCFTGFPQSKVSSS 320
+LS+ + K+ + D FTGF +S +SSS
Sbjct: 791 HLSSCSLKFLAIDDSFTGFLESSLSSS 817
>06_01_0272 + 2016836-2017963
Length = 375
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +3
Query: 366 EEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWIT 518
E V ++ +RYY + ++ G+T P E F + P W T
Sbjct: 148 EAVRLASKRIRYYQAGSSEMFGSTPPPQSESSPFHPRSPYAAAKVAAHWYT 198
>05_03_0483 + 14585581-14587977
Length = 798
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 57 DVKYTKLFINNEWVDAVSKKTFPTINPQ-DETVITQVAEG 173
DVK + ++++WV VS +NP D T ++ V +G
Sbjct: 590 DVKTANILLDDKWVAKVSDFGLSKVNPDIDATHVSTVVKG 629
>08_02_0096 -
12296913-12296951,12297205-12297282,12297335-12297345,
12298140-12299044,12299074-12299243
Length = 400
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 184 ILIWPSPQQRKHSTVIPHGVPWTLLNAASYC 276
+++W +H P G+PW + +AA +C
Sbjct: 105 LIVWDPVTGERHRVPEP-GIPWLIYSAAVFC 134
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -2
Query: 478 SFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARYLDWD 299
SF R FPN+ F A ++ + +TS+ + +S VSS +D
Sbjct: 951 SFYAGARLVEDRKTTFPNVFRVFLALTMAAIGVSHTSNLTSDSSKAKSAVSSIFAIVDRK 1010
Query: 298 SRSSAS 281
SR S
Sbjct: 1011 SRIDPS 1016
>04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 187 ISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTSTFTMLM 38
I L S T + +S + K F+ + ++ L +NSLVY T + T ++
Sbjct: 1149 IGTLLLSITAFLMISLPSNFIKKEFVGMSLSYGLSLNSLVYYTISMTCMI 1198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,501,891
Number of Sequences: 37544
Number of extensions: 302987
Number of successful extensions: 852
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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