Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305F10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-7|CAE17780.1|  263|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL032647-3|CAA21690.1|  316|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    28   4.7  
L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF025458-4|AAB70975.4|  374|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81525-7|CAE17780.1|  263|Caenorhabditis elegans Hypothetical
           protein F33A8.10 protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 359 AENNKKIEEAQRKLAEERLAMIEEQRK 279
           AE NKKIEE  + +++ER +M    R+
Sbjct: 164 AEKNKKIEEFMKTMSDERQSMYTNYRR 190


>AL032647-3|CAA21690.1|  316|Caenorhabditis elegans Hypothetical
           protein Y57A10B.3 protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 26  HLIICFLS*QTMYKDDLLRY*KFTKLLNCIKCPSE 130
           H+  CFLS  + Y  DL  Y   T LLN I+ P E
Sbjct: 170 HVSSCFLSFHSTYFHDLFEYDNSTSLLN-IEIPVE 203


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3

Query: 345 KN*RSTAQAGGREISDDRRTKKNG*GTTKAEKRTREADKRGTKED 211
           +N ++ A+A   E SDD   KKNG      +K  ++  ++  K D
Sbjct: 532 QNKKNKAEAEASESSDDEEEKKNGVEVNGQKKPAKKQQQKKQKAD 576


>L23646-1|AAA28041.1|  244|Caenorhabditis elegans Hypothetical
           protein F44E2.3 protein.
          Length = 244

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/32 (37%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
 Frame = -1

Query: 359 AENNKKI---EEAQRKLAEERLAMIEEQRKMD 273
           AE  +K+   EE+++K  E+RLAM+E++ +++
Sbjct: 175 AELERKVLEAEESRKKFEEDRLAMLEQKSQLE 206


>Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical
           protein T05A10.3 protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 8/28 (28%), Positives = 20/28 (71%)
 Frame = -1

Query: 356 ENNKKIEEAQRKLAEERLAMIEEQRKMD 273
           + + ++ + +R++ EER  + EEQ+++D
Sbjct: 221 QEHHEVSDEERRIEEERFRLEEEQKRLD 248


>AF025458-4|AAB70975.4|  374|Caenorhabditis elegans Hypothetical
           protein C01B12.2 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 359 AENNKKIEEAQRKLAEERLAM 297
           AEN K+ EEA+RKL E++ A+
Sbjct: 219 AENQKRQEEAERKLQEKQNAI 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,187,987
Number of Sequences: 27780
Number of extensions: 100709
Number of successful extensions: 401
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)