Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305F08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.7  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 144 ILDHLTDVLSGVGVCDLI 91
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 480 AWSLSIFVLAFSAFXPVDVLHEHTLVLEHITLRLH 376
           +W++ I ++    +   D+L  HT    HI   L+
Sbjct: 185 SWAVGIGIMLAQYYLQADMLLWHTFGYYHILAMLN 219


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 140 LIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFC 21
           L I   +C  ++F + L+     + FF    I     LFC
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 480 AWSLSIFVLAFSAFXPVDVLHEHTLVLEHITLRLH 376
           +W++ I ++    +   D+L  HT    HI   L+
Sbjct: 185 SWAVGIGIMLAQYYLQADMLLWHTFGYYHILAMLN 219


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 267 TRIGCTSSLTKATVTTLSTC 208
           TRI  T S    T  TL TC
Sbjct: 42  TRISSTVSRNTDTYPTLETC 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,676
Number of Sequences: 336
Number of extensions: 2908
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)