Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305F06f
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   3.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   3.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.5  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 83  PRDIGSXRSLINAIPASXFLWS 18
           P+D G   SL N  PA+ F+ S
Sbjct: 84  PKDFGDVDSLGNLDPANEFIVS 105


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 83  PRDIGSXRSLINAIPASXFLWS 18
           P+D G   SL N  PA+ F+ S
Sbjct: 100 PKDFGDVDSLGNLDPANEFIVS 121


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 322 TICALXACCIXGTSXGSWTS*XRCCWRASQCT 417
           ++C+L   C  G +   + +  +CCW    CT
Sbjct: 585 SVCSLP--CEVGQAK-KYVAGEQCCWHCFNCT 613


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,571
Number of Sequences: 438
Number of extensions: 1280
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)