Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 129 2e-30
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 128 2e-30
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 123 8e-29
09_06_0359 + 22508900-22509439 107 4e-24
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 106 1e-23
02_01_0160 + 1116160-1116678 98 4e-21
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 89 2e-18
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 86 2e-17
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 80 9e-16
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 74 8e-14
10_01_0309 + 3417602-3418147 73 1e-13
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 71 4e-13
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 68 5e-12
06_01_0214 + 1634171-1634173,1634263-1634742 63 1e-10
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 62 2e-10
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 60 1e-09
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 52 3e-07
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 2e-06
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 45 4e-05
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 2.3
10_01_0310 + 3425099-3425218 29 3.0
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 28 5.2
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 27 6.9
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 27 6.9
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 129 bits (311), Expect = 2e-30
Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Frame = +3
Query: 150 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 314
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 315 KPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMA 494
+G GYKGS FHRVIK+FMIQ +SIYG F+DENFKL H G G +SMA
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMA 183
Query: 495 NAGKDTNGS 521
NAG +TNGS
Sbjct: 184 NAGPNTNGS 192
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 128 bits (310), Expect = 2e-30
Identities = 63/110 (57%), Positives = 73/110 (66%)
Frame = +3
Query: 192 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 371
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 372 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
MIQ RSIYGE F+DENF LKH G G LSMANAG DTNGS
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGS 172
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 123 bits (297), Expect = 8e-29
Identities = 67/132 (50%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Frame = +3
Query: 147 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 326
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 327 EG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWL 485
G +KGS FHR+I +FMIQ SIYG +F DENFK+KH G G L
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLL 152
Query: 486 SMANAGKDTNGS 521
SMANAG+DTNGS
Sbjct: 153 SMANAGRDTNGS 164
>09_06_0359 + 22508900-22509439
Length = 179
Score = 107 bits (258), Expect = 4e-24
Identities = 59/113 (52%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Frame = +3
Query: 204 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 362
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 363 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
NFM Q SIYG+RF DENFKL+H G G LSMANAG +TNGS
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGS 119
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 106 bits (254), Expect = 1e-23
Identities = 59/117 (50%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Frame = +3
Query: 192 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 350
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 351 HRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
HR+I FMIQ SIYG F DENFK+ H G LSMAN KDTNGS
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGS 153
>02_01_0160 + 1116160-1116678
Length = 172
Score = 97.9 bits (233), Expect = 4e-21
Identities = 55/113 (48%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Frame = +3
Query: 204 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 362
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 363 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
FM Q SIYGE+F DE FK KH G LSMANAG +TNGS
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGS 117
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 89.0 bits (211), Expect = 2e-18
Identities = 53/113 (46%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = +3
Query: 207 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 362
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 363 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
K FM Q SIYG FEDENF L+H G LSMANAG +TNGS
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGS 121
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 85.8 bits (203), Expect = 2e-17
Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +3
Query: 180 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 344
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 345 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 500
+FHRVIK+FMIQ SIYG +F+DENF KH G G LSM +
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 80.2 bits (189), Expect = 9e-16
Identities = 57/157 (36%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Frame = +3
Query: 117 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 296
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 297 FFQLAQKPEGEGY----------------------KGSKFHRVIKNFMIQXXXXXXXXXX 410
F L +G KGS HR++K FM+Q
Sbjct: 65 FRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGT 124
Query: 411 XXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
SIYG FEDENF LKH G LSMANAG DTNGS
Sbjct: 125 GGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGS 161
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 73.7 bits (173), Expect = 8e-14
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 231 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 410
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRG 71
Query: 411 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGS 521
SIYG +FEDE +LKH GAG LSMANAG +TNGS
Sbjct: 72 G-ESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGS 108
>10_01_0309 + 3417602-3418147
Length = 181
Score = 72.9 bits (171), Expect = 1e-13
Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Frame = +3
Query: 192 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 350
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 351 HRVIKNFMIQXXXXXXXXXXXXRSIY---GERFEDENFKLKHYGAGWLSMANAGKDTNGS 521
HRV+ FM Q S F DE F +KH G G +SMANAG +TNGS
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +3
Query: 336 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTN 515
+GS FHRVIK FM+Q SIYG +FEDENF LKH G LSMAN+G +TN
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 516 GS 521
GS
Sbjct: 178 GS 179
Score = 36.7 bits (81), Expect = 0.011
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 153 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 329
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 330 GYKGSKFHRVIKNF 371
G K H K+F
Sbjct: 69 GAVTGK-HLHYKDF 81
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +3
Query: 189 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 347
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 348 FHRVIKNFMIQ 380
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 237 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 416
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPTGTGKGGT 64
Query: 417 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGS 521
SI+G++F DE LKH G +SMAN+G +TNGS
Sbjct: 65 -SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGS 99
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 62.5 bits (145), Expect = 2e-10
Identities = 47/117 (40%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 174 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 353
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 354 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGS 521
R IKNFMIQ SI+G+ F+DE N KL H G G +SMAN+G TNGS
Sbjct: 388 RSIKNFMIQGGDPTGTGSGG-ESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGS 443
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 237 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 416
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQTGDPLGDGTGG- 558
Query: 417 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGS 521
+SI+G FEDE K L+H LSMANAG +TNGS
Sbjct: 559 QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGS 594
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 52.0 bits (119), Expect = 3e-07
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +3
Query: 243 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 422
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 423 IYGERFEDE-NFKLKHYGAGWLSMANAG-KDTNGS 521
IYG F DE + +L+ G ++ ANAG +NGS
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGS 112
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 177 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 332
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 333 YKGSKFHRVIKNFMIQ 380
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Frame = +3
Query: 237 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXX 407
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGD 64
Query: 408 XXXRSIYGE--RFEDENFK--LKHYGAGWLSMANAGKDTNGS 521
+ +YG+ RF D+ + L+H G ++MA+AG++ N S
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNAS 106
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 452 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 309
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 243 GTIVIGLFGKTVPKTTENF 299
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 243 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 380
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 243 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 380
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQ 126
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +3
Query: 117 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 296
G + L ILL+I S KSD K V H + IGDD + +I L K V T+ N
Sbjct: 349 GEPQLELLILLYIISLKSDAYDKLASVAHDL-----IGDDEVDSISSVL--KVVRVTSSN 401
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,258
Number of Sequences: 37544
Number of extensions: 231086
Number of successful extensions: 454
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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