Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 42 4e-04
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_23898| Best HMM Match : Ldl_recept_a (HMM E-Value=1.4013e-45) 37 0.012
SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27) 36 0.020
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 36 0.027
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 35 0.035
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 34 0.062
SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0) 34 0.062
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40) 33 0.11
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 33 0.11
SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15) 33 0.11
SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014) 33 0.14
SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15) 33 0.19
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 32 0.25
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.44
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 31 0.58
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 31 0.76
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_52147| Best HMM Match : EGF (HMM E-Value=0) 31 0.76
SB_42006| Best HMM Match : EGF_2 (HMM E-Value=8.7e-05) 31 0.76
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 31 0.76
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.76
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 31 0.76
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.0
SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15) 30 1.0
SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34) 30 1.0
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 30 1.3
SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.3
SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45) 30 1.3
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 30 1.3
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_17371| Best HMM Match : EGF_CA (HMM E-Value=0.36) 30 1.3
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4) 29 1.8
SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24) 29 1.8
SB_48923| Best HMM Match : EGF_CA (HMM E-Value=3.2e-27) 29 2.3
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 29 2.3
SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011) 29 3.1
SB_39510| Best HMM Match : VWA (HMM E-Value=0) 29 3.1
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_34423| Best HMM Match : 7tm_2 (HMM E-Value=6e-07) 29 3.1
SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011) 29 3.1
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 28 4.1
SB_54457| Best HMM Match : EGF (HMM E-Value=4.6e-31) 28 4.1
SB_22727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 4.1
SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20) 28 5.4
SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30) 28 5.4
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 5.4
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 28 5.4
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 5.4
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.4
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.4
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 27 7.1
SB_7514| Best HMM Match : OATP (HMM E-Value=0) 27 7.1
SB_2014| Best HMM Match : MAM (HMM E-Value=0) 27 7.1
SB_44578| Best HMM Match : PAN (HMM E-Value=0.00021) 27 7.1
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 27 7.1
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 27 7.1
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 27 9.4
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_37547| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 27 9.4
SB_20425| Best HMM Match : EGF_CA (HMM E-Value=1.2e-20) 27 9.4
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = -3
Query: 501 CVAPPE--KCSCNDGFS-LIDGECRSVC-RNCENGVCSKDNVCLCNESFEMHNGTCRRKC 334
CV PE +C C G+ + G+C VC + C NG C+ +VC C SF C +C
Sbjct: 209 CVDTPEFFRCVCKPGYEQALSGQCVPVCTQGCVNGKCTSPDVCTC--SFGWTGPNCSVEC 266
Query: 333 ---GHHDC 319
GH C
Sbjct: 267 LCNGHGHC 274
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 41.5 bits (93), Expect = 4e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCEN-GVCSKDNVCLCNESF 367
C CN G+ ++G+C +C C N G C ++N C C + F
Sbjct: 1390 CICNPGYKKVNGKCEKLCIRCMNGGSCVENNGCECPKGF 1428
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 474 CNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKC 334
C D + G C + C N S +C+CN ++ NG C + C
Sbjct: 1364 CTDQDECLKGPCPQNAK-CVNNFGSY--LCICNPGYKKVNGKCEKLC 1407
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLID-GECRSVCRNCEN--GVCSK-DNVCLCNESFEMHNGT 349
C++G C P+KC C +S D G C NC + G CS + C C +
Sbjct: 14 CSHGRCTTAPDKCECEKYWSGADCGTYIGTCNNCSSVGGTCSAGPDTCACRPGYTGPTCA 73
Query: 348 CRR--KCGHHDC 319
++ CGH C
Sbjct: 74 VQKCDGCGHGSC 85
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRK 337
C G C + P KC C ++ +C ++ C C C C+ + +CR
Sbjct: 126 CVYGTCPSDPFKCECRAPYT--GTQCDTI--KCPE--CCPPETCDCSSGHQ----SCRPD 175
Query: 336 CGHHDCGQENTFSGDRL 286
H C ++ F G+ L
Sbjct: 176 WHHDCCLVKSCFHGNTL 192
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 516 CTNGXCVAPPEKC--SCNDGFSLIDGECRSVCRNCENGVCSKDNVCLC 379
C NG C+ + SC G +L+ C C+N G CS N C C
Sbjct: 315 CNNGTCICTKQYTGKSCEHGINLVLSSCVPFCQN--GGTCSSPNTCKC 360
>SB_23898| Best HMM Match : Ldl_recept_a (HMM E-Value=1.4013e-45)
Length = 291
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -3
Query: 519 KCTNGXCVAPPEKC----SCNDGFSLID-GECRSVCRNCENGVCSKDNVCLCNESFEMHN 355
KC NG CV KC C DG + G+C S C NG C N +C++ + +
Sbjct: 103 KCNNGHCVHRNWKCDGSNDCRDGTDEVGCGKCGSTQFRCRNGNCINRNY-VCDKDNDCGD 161
Query: 354 GTCRRKCGHHDCG 316
G+ C + G
Sbjct: 162 GSDEVACSRLNGG 174
>SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27)
Length = 286
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSV--C----RNC-ENGVCSKDN---VCLCNESFEMHNGTC 346
C C GF + DGEC+ + C C N +CS C C E F+M C
Sbjct: 171 CVCKKGFEMSDGECKDIDECSLKPAKCSSNSICSNTQGSYKCECGEGFKMQGNVC 225
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -3
Query: 444 ECRSVCRNCENGVCSKDNV----CLCNESFEMHNGTCR 343
EC C N K+ C+C + FEM +G C+
Sbjct: 148 ECADKQSRCPNNAVCKNTAGSYDCVCKKGFEMSDGECK 185
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Frame = -3
Query: 516 CTNGXCVAPPE--KCSCNDGFSLIDG---------ECRSVCRNCENGVCSKDN---VCLC 379
C NG C+ P +C CNDG+ L G EC + C NG C C C
Sbjct: 269 CPNGRCIDMPSGFRCVCNDGYILPTGRDNKCVDKNECEADSTLCTNGRCVNTEGSYKCTC 328
Query: 378 NESFE--MHNGTCRRKCG 331
N ++ C +CG
Sbjct: 329 NNGYKPSPDGKRCVGRCG 346
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -3
Query: 444 ECRSVCRNCENGVC---SKDNVCLCNESFEMHNGTCRRKCGHHDCGQENT 304
ECR C NG C C+CN+ + + G + ++C ++T
Sbjct: 261 ECRMDANACPNGRCIDMPSGFRCVCNDGYILPTGRDNKCVDKNECEADST 310
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 35.5 bits (78), Expect = 0.027
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = -3
Query: 516 CTNGX-CVAPPEKCSCNDGFSLIDG----ECRSVCRNCENGVCSKDNVCLCNESFEMHNG 352
CTNG C A +C+C DG S G ECR C ++ N C C+ NG
Sbjct: 372 CTNGARCNAVTGQCACTDGCSCNAGWTGPECRDPC-GLDSWGPGCTNTCQCS-----RNG 425
Query: 351 TCRRKCGHHDCGQENTFSGDR 289
C G C F+GDR
Sbjct: 426 ECDAASGR--CACAPGFTGDR 444
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGV-CSKDNVCLCNESFEMHNGTCRR 340
C NG C A C+C G+ C C ++G C CLC +NGTC
Sbjct: 632 CVNGSCNATDGSCNCAAGYH--GNACDRPCPAGKHGANCGLK--CLC-----ANNGTCNA 682
Query: 339 KCGHHDCG 316
G CG
Sbjct: 683 ITGRCSCG 690
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 510 NGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGV-CSKDNVCLC 379
NG C A +C+C GF+ C S C G CS N C C
Sbjct: 424 NGECDAASGRCACAPGFT--GDRCESRCPKGYYGTNCS--NACTC 464
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Frame = -3
Query: 507 GXCVAPPEKCSCNDGFS---LIDG--------ECRSVCRNCENGVCSKDNVCLCNESFEM 361
G C + KC C G+S ID EC C+ C NG CN +
Sbjct: 189 GSCDSRTGKCHCMPGYSGPTCIDECPTGYYGYECTQKCQ-CVNGASCDRRTGSCNCTVGW 247
Query: 360 HNGTCRRKCGHHDCGQ 313
C++ C H+ G+
Sbjct: 248 IGKFCQQTCPHNTWGE 263
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 516 CTN-GXCVAPPEKCSCNDGFSLIDGECRSVCRNCEN-GVCSKDNVCLCNESF 367
C+N G CVA + C C+ FS D + NC N G C + C+C++ F
Sbjct: 1352 CSNHGQCVAR-DTCVCDQKFSGNDCSADTCENNCSNHGQCVARDTCVCDQKF 1402
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 14/68 (20%)
Frame = -3
Query: 480 CSCNDGFSLIDGEC--RSVCRN----CE-NGVCSK---DNVCLCNESFEMHNGTCR--RK 337
C C +G+ ++DGEC ++ C C+ N +C+ +C C F+ TC +
Sbjct: 607 CVCKNGYQIVDGECKDKNECVGSDLLCDPNALCTNTPGSYLCRCKSGFQGDGKTCADIDE 666
Query: 336 C--GHHDC 319
C G HDC
Sbjct: 667 CSDGSHDC 674
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -3
Query: 489 PEKC--SCNDGFSLID--GECRSVCRN---CENGVCSKDNVCLCNESFEMHNGTCRRKCG 331
P KC +C D + +D G+ VC+N +G C N C+ ++ N C G
Sbjct: 585 PVKCDPTCGDLETCVDIKGKFTCVCKNGYQIVDGECKDKNECVGSDLLCDPNALCTNTPG 644
Query: 330 HHDCGQENTFSGD 292
+ C ++ F GD
Sbjct: 645 SYLCRCKSGFQGD 657
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 34.3 bits (75), Expect = 0.062
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCS----CNDGFSLIDGECRSVCRN---CENGVCSKDNVCLCNESFEM 361
KC +G CV P + C+ C DG + C + C + C +G C ++ CN +
Sbjct: 80 KCPDGKCVHPSKFCNGESDCTDGSD--EWSCDNSCSSRHACADGTCVTWSL-TCNGVSDC 136
Query: 360 HNGTCRRK-CGHHD 322
+G+ K CG HD
Sbjct: 137 QDGSDEPKLCGKHD 150
>SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 467
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFE 364
KC CN ++ G+ C +CE G+CS+ C+ FE
Sbjct: 287 KCKCNRKYT---GQYCEECPSCEGGICSRSKDCILCTKFE 323
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 33.9 bits (74), Expect = 0.082
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = -3
Query: 519 KCTNGXCVAPPEKC----SCNDGFSLIDGECRSVCR----NCENGVCSKDNVCLCNESFE 364
+CTNG C+ C C+DG + C C NG+C +C++ +
Sbjct: 633 RCTNGRCIPRRWVCDKDDDCHDGSDERNSCATMTCSENEITCGNGICVVKR-WVCDQDDD 691
Query: 363 MHNGTCRRKCGHHDCGQENTFS 298
+GT C H C + N F+
Sbjct: 692 CGDGTDELNCAPHTC-RPNEFT 712
>SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40)
Length = 580
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
C+C+ GF+ +C + + C++ C + C E +N TC +DC
Sbjct: 144 CTCSAGFT--GSDCETQVKPCDSSPCKNNATCTNKEDNSGYNCTCSAGFTGNDC 195
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
C+C+ GF+ +C + + C++ C + C+ ++ +N TC DC
Sbjct: 104 CTCSTGFT--GSDCETQVKPCDSSPCKNNATCINDKDNSGYNCTCSAGFTGSDC 155
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCR--NCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
+C C G S G C + R +C++ C + C+ E +N TC DC
Sbjct: 21 RCECQKGSS--SGACANATRVKSCDSSPCKNNATCINKEDNSGYNCTCSAGFTGSDC 75
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/74 (22%), Positives = 29/74 (39%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTF 301
C+C+ GF+ +C + + C+ C + C + +N TC DC +
Sbjct: 64 CTCSAGFT--GSDCETQVKPCDTIPCKNNATCTNKDDNSSYNCTCSTGFTGSDCETQVKP 121
Query: 300 SGDRLGKNNT*VLN 259
KNN +N
Sbjct: 122 CDSSPCKNNATCIN 135
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 501 CVAPPEKC--SCNDGFSLIDGECRS--VCRNCENGVCSKDNVCLCNESFEMHNGTCRRKC 334
C++ P K SC D + +C S + +NCE V + V C + F+ G C KC
Sbjct: 1069 CLSQPCKNGGSCRDIVNGYKCDCPSKMIGKNCETVVKDQCPVPNCAKKFD--GGKCNPKC 1126
Query: 333 GHHDCGQENT 304
H+C + T
Sbjct: 1127 NTHECNWDGT 1136
>SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 186
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTF 301
C+C+ GF+ +C + + C + C ++ C + ++ TC DC + T
Sbjct: 102 CTCSTGFT--GSDCETQVKPCGSSPCKNNSTCTNKDENSGYDCTCSTGFTESDCETQGTI 159
Query: 300 S 298
S
Sbjct: 160 S 160
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCR--NCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQE 310
+C C S G C + R C++ C + C E +N TC DC +
Sbjct: 59 RCECPKESS--SGTCANSARVKPCDSSPCQNNATCTNKEDNSGYNCTCSTGFTGSDCETQ 116
Query: 309 NTFSGDRLGKNNT 271
G KNN+
Sbjct: 117 VKPCGSSPCKNNS 129
>SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014)
Length = 416
Score = 33.1 bits (72), Expect = 0.14
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -3
Query: 501 CVAPPEKCSCNDGFSLIDGECRSVCRNCENG-VCSKDNVC-LCNESFEMH-NGTCRRKCG 331
CV C C DGF C VC + G C D C + N H +G+C K G
Sbjct: 150 CVHTDGSCLCKDGFH--GDTCSKVCDAGKFGSTCESDCTCHMTNTDRCDHVDGSCLCKAG 207
Query: 330 HHDCGQENTFSGDRLGKNN 274
E +F+G K N
Sbjct: 208 FQGDRCEKSFTGPGCDKGN 226
>SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15)
Length = 165
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFS---LIDGECRSVCRNCENGVCSKDNVCLCNESFE 364
C NG P+ C C G+ + C+ C N G C N C C FE
Sbjct: 104 CYNGGECVRPDVCKCRAGYEGPLCLTPVCKPSCVN--GGYCVGSNTCRCLRGFE 155
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = -3
Query: 501 CVAPPEKCS---CNDGFSLIDGECRSVCRNCENGVCSKD---NVCLCNESFEMHNGTCRR 340
C + CS C +G S ID E C C G K+ V C H GTC +
Sbjct: 1108 CQFNDDDCSAKPCRNGGSCIDNERFYTCA-CPAGYTGKNCETEVQECQSEPCQHGGTCTK 1166
Query: 339 KCGHHDCGQENTFSG 295
+ ++C T++G
Sbjct: 1167 RFNGYECSCAPTYTG 1181
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = -3
Query: 492 PPEKC---SCNDGFSLID--GECRSVCRNCENG-VCSKDNVCLCNESFEMHNGTCRRKCG 331
PP C C G + +D G+ R VC + G +C K C+ + +H GTC K
Sbjct: 652 PPSPCLSNPCRHGGTCMDEGGKFRCVCADGYKGELCEKKAQHFCHPNPCLHGGTCDEKED 711
Query: 330 HHDCGQENTFSGD 292
+ C + G+
Sbjct: 712 GYTCRCIGAYRGE 724
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -3
Query: 516 CTNGX-CVAPPE--KCSCNDGFS--LIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNG 352
C NG C + + KC+CN+G+S + + C +C D C+C+ + +
Sbjct: 581 CLNGGHCTSAGDSYKCACNEGYSGTTCEVTLHTECMDCHVNAGCTDGKCVCHSGYYGNGH 640
Query: 351 TC 346
C
Sbjct: 641 HC 642
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENG-VCSKD-NVCLCNESFEMHNGTC 346
+C N V C N + G + C G +C D N C N +NGTC
Sbjct: 1973 RCMNRTNVCASSPCQNNATCRDVMGHVKCTCPTGFTGALCETDINECASNPC---NNGTC 2029
Query: 345 RRKCGHHDCGQENTFSG 295
+ G +DC F+G
Sbjct: 2030 LQGIGRYDCSCFQGFTG 2046
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGH 328
C+C G++ D C ++ NC+ C+ +C + ++ N TC K G+
Sbjct: 2114 CTCALGYT--DHNCSTIIDNCDPNPCNHSGIC----TNKIGNYTCLCKGGY 2158
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 513 TNGXCVAPPEKCS---CNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNE--SFE-MHNG 352
T C +C+ CN+G + + G R C +C G ++ NE SF +++G
Sbjct: 2008 TGALCETDINECASNPCNNG-TCLQGIGRYDC-SCFQGFTGQNCQVDINECQSFPCLNSG 2065
Query: 351 TCRRKCGHHDC 319
TCR + G++ C
Sbjct: 2066 TCRDEVGNYSC 2076
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -3
Query: 516 CTNGXCVAPPEK--CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCR 343
C NG C+ + CSC GF+ C+ C++ C C E+ N +CR
Sbjct: 2024 CNNGTCLQGIGRYDCSCFQGFT--GQNCQVDINECQSFPCLNSGTC----RDEVGNYSCR 2077
Query: 342 RKCGH 328
G+
Sbjct: 2078 CPYGY 2082
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 516 CTNGX-CVAPPEK--CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C NG CV K C C GFS G C++ C + C+ NV C + + TC
Sbjct: 2607 CGNGATCVDEINKYSCLCPAGFS--GGNCQTNIDECASRPCA--NVGSCIDRINSYECTC 2662
>SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
KC N + C+CN GFS EC + C G + D CN H+ TC
Sbjct: 495 KCNN---IIGSHHCTCNPGFSGDGRECIDI-DECVTGDHTCDKNAKCNNIVGSHHCTC 548
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
KC N + C+CN GFS EC + C G + D CN + ++ TC
Sbjct: 331 KCNN---IIGSYHCTCNPGFSGDGRECTDI-DECVTGDHTCDKNARCNNTIGSYHCTC 384
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENG--VCSK----DNV-----CLCNE 373
KC N + C CN GFS EC + C G C K +N+ C+CN
Sbjct: 167 KCNN---IIGSYHCMCNPGFSKDGRECTDI-DECVTGDHTCDKNARCNNIIGSYHCMCNP 222
Query: 372 SFEMHNGTCR--RKC--GHHDCGQENTFSGDRLGKNN 274
F C +C G H C +N G+ +G ++
Sbjct: 223 GFSGDGRNCTDIDECVTGDHTC-DKNARCGNIIGSHH 258
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENT 304
C+CN GFS EC + C G + D CN + ++ CR G G+E T
Sbjct: 382 CTCNPGFSGDGRECTDI-DECVTGDHTCDKNARCNNTIGSYH--CRCNPGFSGDGRECT 437
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN + ++ TC
Sbjct: 423 CRCNPGFSGDGRECTDI-DECVTGDHTCDKNARCNNTIGSYHCTC 466
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
KC N + C+CN GFS EC + C G + D CN + ++ C
Sbjct: 536 KCNN---IVGSHHCTCNPGFSGNGRECTDI-DECGTGDHTCDKNARCNNTIGSYDCMC 589
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN ++ TC
Sbjct: 300 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNIIGSYHCTC 343
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Frame = -3
Query: 516 CTN-GXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGV---CSKDNVCLCNESFEMHNGT 349
CT+ CV C N I G +C +G C+ + C+ + N
Sbjct: 231 CTDIDECVTGDHTCDKNARCGNIIGSHHCICNPGFSGDGKNCTDIDECVTGDHTCDKNAK 290
Query: 348 CRRKCGHHDCGQENTFSGD 292
C G H C FSGD
Sbjct: 291 CNNTIGSHHCMCNPGFSGD 309
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTF 301
C+CN GFS EC + C G D+ C N C G H C F
Sbjct: 464 CTCNPGFSGDGRECTDM-DECVTG----DHTC-------DKNAKCNNIIGSHHCTCNPGF 511
Query: 300 SGD 292
SGD
Sbjct: 512 SGD 514
>SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 299
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGV--------CSKDN---VCLCNESFEMHNGTCRRK 337
C C G++L++ C + C GV C +N C C F + N TC+ K
Sbjct: 181 CKCKPGYTLVNNTCEDI-NECALGVANCPASADCVNNNGSYTCRCKPGFTLVNNTCKGK 238
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 498 VAPPEK-CSCNDGFSLIDGECRSVCRNCENGVCSKDNV 388
V P +K C C G+ ++ + +C+ C NG+ S D +
Sbjct: 370 VTPVKKPCRCQPGYEIVSNGGKYMCQQCMNGLHSVDGI 407
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = -3
Query: 516 CTNGX-CVAPPEKCSCNDGFSLIDGECR-SVCRNCENGVCSKDNVCLCNESFEMHNGTCR 343
C NG C C G +C C C+ ++ C+C E +E TC
Sbjct: 359 CRNGGTCSEMNNAAVCACGVQFEGNQCEIDKCAKCDMHATCRNGKCVCMEGYEGDGETCT 418
Query: 342 RKCG 331
K G
Sbjct: 419 AKGG 422
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGEC-RSVCRNCENGV-CSKDNVCLCNESFEMHNGTCR 343
C N C P C N G L +G R +C+ +G C D C+ + + G C
Sbjct: 207 CQNHVC--RPNPCQ-NGGSCLEEGGLGRCICQMGYHGQHCENDRCRFCSVNADCILGHCV 263
Query: 342 RKCGHHDCGQ 313
K G+H G+
Sbjct: 264 CKDGYHGDGK 273
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Frame = -3
Query: 480 CSCNDGFSL--IDGECRSVCRNCENGVCSKDNV-------CLCNESFEMHNGTCR 343
CSC GF L +C V GVCS+ + C+C+E + + +G+C+
Sbjct: 3391 CSCWPGFELKPFTNKCEDVNECLHFGVCSQRCINTRGSFKCVCHEGYVLTSGSCK 3445
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGE--CRSVCRNC--ENGVCS-----KDN--VCLCNE 373
KC N CV C ND I E C S R C NG CS +D+ +C C
Sbjct: 3336 KCLNRRCVPVRAVCDSNDDCGDISDELQCPSTNRTCAVNNGGCSQNCTERDSHVICSCWP 3395
Query: 372 SFEM 361
FE+
Sbjct: 3396 GFEL 3399
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 507 GXCVAPPEKCSCNDGFSLID---GECRSVCRNCENGVCSKDNVCLCNESFE 364
G CV +C CN G++ I +C +V + +G C N C C+ ++
Sbjct: 54 GSCVNA-YRCECNSGWTGISCAVPDCAAVSQCSSHGDCVASNTCRCHPGYQ 103
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = -3
Query: 516 CTNGXCVAPPE--KCSCNDGFSLIDGECRSVCRN--CENG-VCSKDNV---CLCNESFEM 361
C +G CV+ +C C+ G+ C C NG C+K + C C +E
Sbjct: 780 CVHGACVSSNGVVRCECSAGYLGKSCNMTDPCEPSPCLNGGSCTKSGLAHSCECTPGYEG 839
Query: 360 HNGTCRRKCGHHDC 319
N + ++CG C
Sbjct: 840 ANCSITKRCGDAPC 853
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRK 337
C NG CV SC C CE+ C + VC+ E+F +++ R
Sbjct: 354 CVNGECVGNGHNSSCKCWKGYSGASCDVKISACEHRPCVQ-GVCIGRENFTLYHCKWNRL 412
Query: 336 CGHHDC 319
+C
Sbjct: 413 YTGRNC 418
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Frame = -3
Query: 516 CTNGXCVAPPE--KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNE--SFE--MHN 355
C NG CV+ C C GF C C + C N CL + SFE H
Sbjct: 966 CLNGVCVSTSSTYTCRCTVGFK--GTRCEHAMNTCYSNPCIHGN-CLVRDDSSFECICHK 1022
Query: 354 GTCRRKC 334
G KC
Sbjct: 1023 GFTGTKC 1029
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/70 (24%), Positives = 26/70 (37%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRK 337
C +G CV + C F EC C+ C +N C + + C+R
Sbjct: 853 CRHGHCVTRRDALFCQCDFGYYGAECDRRMDYCKLKPCVVEN-GWCVNTQQGFRCVCKRG 911
Query: 336 CGHHDCGQEN 307
G C ++N
Sbjct: 912 YGGLRCHKKN 921
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCEN-GVC-SKDNVCLCNESF 367
CTN + C+C+ GF+ D E C+N G C S C C F
Sbjct: 503 CTNKVAIPGDYSCACHTGFTGKDCEIVKDSCGCQNGGTCNSTSRSCTCPAMF 554
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCR--NCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQ 313
KC C G+ I EC +V NC N CS C+ S + N C DC Q
Sbjct: 2642 KCECFVGY--IGKECENVSSVDNCGNQTCSGRGNCISQVSSYLCN--CTTDYSGKDCLQ 2696
>SB_52147| Best HMM Match : EGF (HMM E-Value=0)
Length = 364
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = -3
Query: 516 CTNGXCVAPPE--KCSCNDGFSLIDGECRSV---CRN--CENGVC---SKDNVCLCNESF 367
C NG C++ + +C C++G++ C +V C + C NG C +C C S+
Sbjct: 68 CVNGDCISSNDTFRCVCSEGYT--GDRCETVVDMCISAPCHNGTCINYGSSYICDCFNSY 125
Query: 366 EMH 358
H
Sbjct: 126 TGH 128
>SB_42006| Best HMM Match : EGF_2 (HMM E-Value=8.7e-05)
Length = 326
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGF--SLIDGECRSVCR-NCENGVCSKD-NVCLCNESFEMHNGT 349
C +G C +C C+ G+ L D R++C C G C D N C C ++
Sbjct: 141 CAHGRCTKSRFRCECDPGWHGDLCD---RAMCNVPCHFGACPHDPNKCECYSNYYSPETG 197
Query: 348 CRR 340
C R
Sbjct: 198 CDR 200
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -3
Query: 519 KCTNGXCVAPPEKC----SCNDGFSLIDGECRSVCR-NCENGVC 403
+C +G C++ KC C DG + C + R N ENG+C
Sbjct: 2789 RCDSGHCISSSSKCDFETDCCDGSEERNSTCTAYTRCNFENGLC 2832
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCND--GFSLIDGECRSVCRNC--ENGVCS 400
KCTNG C+ + C D G + +G C C E +C+
Sbjct: 3210 KCTNGGCIQKSKLCDFTDDCGDNSDEGRCALYPARCNFETDLCN 3253
>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 263
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C+CN GFS EC + C G + D CN + ++ TC
Sbjct: 20 CTCNPGFSGNGRECTDI-DECVTGDHTCDKNAKCNNTIGSYHCTC 63
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN ++ TC
Sbjct: 102 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNIIGSYHCTC 145
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRR 340
KC N + C+CN GFS G+ R+ C+ + CL + N C
Sbjct: 133 KCNN---IIGSYHCTCNPGFS---GDGRN---------CTDIDECLTGDHTCDKNAKCNN 177
Query: 339 KCGHHDCGQENTFSGDRLGKNNT 271
G + C FSGD G+N T
Sbjct: 178 TIGSYHCTCNPGFSGD--GRNCT 198
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 15/81 (18%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENG--VCSK----DNV-----CLCNESFEMHNGTC--RR 340
C+CN GFS C + C G C K DN C CN F + C
Sbjct: 184 CTCNPGFSGDGRNCTDI-DECVTGDHTCDKNAKCDNTIGSYHCTCNPGFSGNGRECTDTD 242
Query: 339 KC--GHHDCGQENTFSGDRLG 283
+C G H C +N G+ +G
Sbjct: 243 ECVTGDHTC-DKNARCGNTIG 262
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 414 NGV-CSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTFSGDR 289
NG C D V CN S ++NGTC G +C F G R
Sbjct: 319 NGTHCELDTVNDCNSSPCLNNGTCVDDVGFFNCTCPKAFDGVR 361
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNC-ENGVCSKDNVCLCNESFEMHNGTCRRK 337
CSC+ GF+L D + C+ C +N V SK N ++E+ G+ R+K
Sbjct: 603 CSCSPGFALADD--KKSCKACKDNLVMSKINTMPLCFAYEIVYGSRRQK 649
>SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 157
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
C+C+ GF+ +C + + C + C ++ C + ++ TC DC
Sbjct: 102 CTCSTGFT--GSDCETQVKPCGSSPCKNNSTCTNKDENSGYDCTCSTGFTESDC 153
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCR--NCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQE 310
+C C S G C + R C++ C + C E +N TC DC +
Sbjct: 59 RCECPKESS--SGTCANSARVKPCDSSPCQNNATCTNKEDNSGYNCTCSTGFTGSDCETQ 116
Query: 309 NTFSGDRLGKNNT 271
G KNN+
Sbjct: 117 VKPCGSSPCKNNS 129
>SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34)
Length = 262
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Frame = -3
Query: 501 CVAPPE--KCSCNDGFSLIDGEC-RSVCRNCENGVCSKDNVC-----LCNE-SFEMHNGT 349
C+ P +C+C D ++G R +CR C+NG + C C F+ NG
Sbjct: 141 CLPTPNSYQCACPDNMRTVNGMFGRIICR-CQNGEVLVNGQCKTLSGTCAPGQFKCGNGK 199
Query: 348 C---RRKCGH-HDCGQEN 307
C KC H +DCG +
Sbjct: 200 CIPSSWKCDHDNDCGDNS 217
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 441 CRSVCRNCENGVCSKDNVCLC 379
CR V CENGVC D+ C C
Sbjct: 104 CRQVVVKCENGVCQDDH-CAC 123
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESF 367
C N C PP +C + C VC + VC DN+ NE F
Sbjct: 1420 CKNHSCSTPPYS-TCKAVDDKAECVCSKVCPRSLDLVCGTDNITYNNECF 1468
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRN--CENGVCSKDN---VCLC 379
K TN CV+ P K S G + C S C + CE G C + VC+C
Sbjct: 725 KHTNTSCVSCPSKMSTKSG-ATNKSACISFCDSLPCEGGECKEAGNRFVCMC 775
>SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN + ++ TC
Sbjct: 86 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNARCNNTIGSYHCTC 129
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENG--VCSK----DNV-----CLCNESFEMHNGTCR--R 340
C+CN GFS EC + C G C K +N+ C+CN F + C
Sbjct: 250 CTCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNIIGSYHCMCNPGFSGNGRECTDID 308
Query: 339 KC--GHHDCGQENTFSGDRLG 283
+C G H C +N G+ +G
Sbjct: 309 ECVTGDHTC-DKNARCGNTIG 328
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C+CN GFS C + C G + D CN + ++ TC
Sbjct: 209 CTCNPGFSGDGRNCTDI-DECVTGDHTCDKNAKCNNTIGSYHCTC 252
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTF 301
C+CN GFS C + C G D+ C N C G + C F
Sbjct: 127 CTCNPGFSGDGRNCTDI-DECATG----DHTC-------DKNAKCNNTIGSYHCRCNPGF 174
Query: 300 SGDRLGKNNT 271
SGD G+N T
Sbjct: 175 SGD--GRNCT 182
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C+CN GFS EC C G + D C + ++ TC
Sbjct: 332 CTCNPGFSGNGRECTDT-DECVTGDHTCDKNARCGNTIGSYHCTC 375
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTF 301
C+CN GFS EC + C G D C N CR G +DC + F
Sbjct: 373 CTCNPGFSGNGRECTDI-DECVTG----DYTC-------DKNAKCRNNIGSYDCMCMSGF 420
Query: 300 SGD 292
G+
Sbjct: 421 YGN 423
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 414 NGV-CSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTFSGDR 289
NG C D V CN S ++NGTC G +C F G R
Sbjct: 532 NGTHCELDTVNDCNSSPCLNNGTCVDDVGFFNCTCPKGFDGVR 574
>SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 278
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN + ++ TC
Sbjct: 76 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNTIGSYHCTC 119
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN + ++ C
Sbjct: 158 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNARCNNTIGSYHCMC 201
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN + ++ C
Sbjct: 199 CMCNPGFSGNGRECTDI-DECVTGDHTCDKNARCNNTIGSYHCMC 242
>SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45)
Length = 979
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
C C G++ I EC S CE+ C D C + + TC + +C
Sbjct: 275 CDCASGYTGI--ECESQVTPCESNPCKNDGSCANKPNNTGYTCTCTSEYTGTEC 326
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 474 CNDGFSLIDGECRS-VC-RNCENGVCSKDNVCLCNESFEMHNGTCRRKC--GHHDCGQEN 307
C G++ C + +C + C GVC K + C C+ ++ +C + C G D N
Sbjct: 84 CCSGWAQSGNSCPTPICSKGCAQGVCVKPDNCTCHPGYD--GPSCDQACTLGRWDVNCNN 141
Query: 306 T 304
T
Sbjct: 142 T 142
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 444 ECRSVC-RNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDC 319
+C S C ++C + CS+ LC+E E+H C C +C
Sbjct: 1223 KCASQCDKSCPSECCSRAKGALCSEDCEIH---CTPACVRAEC 1262
>SB_17371| Best HMM Match : EGF_CA (HMM E-Value=0.36)
Length = 38
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -3
Query: 516 CTNGXCVAPPE--KCSCNDGFSLIDG 445
C NG C+ P +C CNDG+ L G
Sbjct: 6 CPNGRCIDMPSGFRCVCNDGYILPTG 31
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 11/81 (13%)
Frame = -3
Query: 483 KCSCNDGFSLIDGE-CRSVCRNCENGVCS----------KDNVCLCNESFEMHNGTCRRK 337
+C C G + GE C +V C C + C C F + TC
Sbjct: 1605 RCICLTG---VTGENCETVTNKCTGNPCDPIGGECTSQIEGFTCRCKPGFIGNGSTCHAF 1661
Query: 336 CGHHDCGQENTFSGDRLGKNN 274
DC ++ + D G NN
Sbjct: 1662 DNDEDCDDDDDYCADDSGNNN 1682
>SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4)
Length = 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGT 349
K CN S+ID R C+N C+ D+ C C E+ + + T
Sbjct: 115 KWKCNK-MSIIDIVSRQQCKNVFKKDCTTDDECQCGETQMVSSST 158
>SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)
Length = 652
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -3
Query: 501 CVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCN-ESFEMHNGTCRRKCGHH 325
C+ KC + G + + + R+C++G +D CN + + HNG C +KC
Sbjct: 211 CMPGEFKCQ-STGRCIPESKVCDGTRDCQDG---EDEPLRCNIDECKDHNGHCSQKCNDL 266
Query: 324 DCGQE-NTFSGDRL 286
G + FSG +L
Sbjct: 267 TLGYNCSCFSGYKL 280
>SB_48923| Best HMM Match : EGF_CA (HMM E-Value=3.2e-27)
Length = 83
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSV--CR----NCENGVCSKDN----VCLCNESFEMHNGTCR 343
C C G++L++ C + C NC +N C C F + N TC+
Sbjct: 27 CKCKPGYTLVNNTCEDIDECALGVANCPASADCVNNDGSYTCRCKRGFTLVNNTCK 82
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 474 CNDGFSLIDGECRSVCRNCENGVCSKD---NVCLCNESFEMHNGTCRRKCGHHDC 319
C +G + ++G+ ++VC CE+G NV CN H GTC + + C
Sbjct: 866 CANGATCMNGKDKAVCI-CESGFVGTHCDVNVNECNSMPCQHGGTCIDEVNNFRC 919
>SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGV--------CSKDN---VCLCNESFEMHNGTCR 343
C C G++L++ C+ + C GV C +N C C F + N TC+
Sbjct: 312 CRCKRGYTLVNKTCKDI-DECALGVATCPASADCVNNNGSYTCRCKRGFTLVNNTCK 367
>SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCRNCE-NGVCSKDNVCLCNESFEMHNGTCRRKCGHHD 322
+C+C G+ + C C +C N C D C+CN + TC GH D
Sbjct: 68 RCNCMSGWQGLS--CEVGCGSCHPNAYCMMDK-CVCNPGYIGDGITC-DVTGHED 118
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D +CN + ++ C
Sbjct: 181 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAICNNTIGSYHCRC 224
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
KC N + C+CN GFS C + C G + D CN + ++ TC
Sbjct: 335 KCNN---IIGSYHCTCNPGFSGDGRNCTDI-DECVTGDHTCDKNAKCNNTIGSYHCTC 388
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN ++ TC
Sbjct: 304 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNIIGSYHCTC 347
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C CN GFS EC + C G + D CN ++ TC
Sbjct: 427 CMCNPGFSGDGRECTDI-DECVTGDHTCDKNAKCNNIIGSYHCTC 470
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRR 340
KC N + C+CN GFS G+ R+ C+ + C+ + N C
Sbjct: 458 KCNN---IIGSYHCTCNPGFS---GDGRN---------CTDIDECVTGDHTCDKNAKCNN 502
Query: 339 KCGHHDCGQENTFSGDRLGKNNT 271
G + C FSGD G+N T
Sbjct: 503 TIGSYHCMCNPGFSGD--GRNCT 523
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
C+CN GFS EC C G + D C + ++ TC
Sbjct: 550 CTCNPGFSGNGRECTDT-DECVTGDHTCDKNARCGNTIGSYHCTC 593
>SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 323
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 420 CENGVCSKDNVCLCNESFE 364
C +G+C+ D+ C+C+ FE
Sbjct: 238 CVHGMCTSDDNCMCDRGFE 256
>SB_39510| Best HMM Match : VWA (HMM E-Value=0)
Length = 705
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Frame = -3
Query: 501 CVAPPEKCS---CNDGFSLID--GECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRK 337
C +KC CN + I+ G VC++ G + + C H GTC K
Sbjct: 36 CSLDVDKCKSSPCNKNQNCINSFGSFTCVCKDGFKGDNCETGIDECLNLPCKHGGTCNNK 95
Query: 336 CGHHDCGQENTFSGDRLGKNNT 271
G + C + G +N T
Sbjct: 96 GGSYSCECSTGYVGKNCKQNFT 117
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = -3
Query: 516 CTNGXCVAPPEK----CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGT 349
C NG A P C+C G++ GE NC N V ++ LC + G
Sbjct: 3885 CQNGGTCASPSSSNYTCTCAPGYT---GE------NCTNNVNECNDPDLCK-----NGGV 3930
Query: 348 CRRKCGHHDCGQENTFSG 295
C+ G + C + +SG
Sbjct: 3931 CKDSFGSYSCNCSSAYSG 3948
>SB_34423| Best HMM Match : 7tm_2 (HMM E-Value=6e-07)
Length = 656
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 498 VAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTC 346
+A P K C+ S C+ C++ + + K+ VC C+E E C
Sbjct: 418 IADPRKSDCHRDLS-----CKGKCKSSPSHLLKKEFVCYCDEVCERFVDCC 463
>SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 353
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 420 CENGVCSKDNVCLCNESFE 364
C +G+C+ D+ C+C+ FE
Sbjct: 249 CVHGMCTSDDNCMCDRGFE 267
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 11/55 (20%)
Frame = -3
Query: 480 CSCNDGF-------SLID-GECRSVCRNCENGVCSK---DNVCLCNESFEMHNGT 349
C+C G+ S ID EC+ R C NGVC CLC + + + GT
Sbjct: 322 CTCGKGYKQSVDSRSCIDVDECQEDPRLCTNGVCRNTPGSFECLCAKGYAIAKGT 376
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
Frame = -3
Query: 516 CTNGXCVAPPEK--CSCNDGFSL-------ID-GECRSVCRNCENGVCSK---DNVCLCN 376
C NG C+ C C G++L ID EC+ V CENG C+ C C
Sbjct: 6 CRNGMCINTEGSFTCQCIAGYTLSADRRHCIDVNECQDVPGFCENGRCTNTIGGARCECV 65
Query: 375 ESFEMH-NGTCRRKCGHHDCGQENTF 301
+ ++ G R ++C + F
Sbjct: 66 AGYALNTEGKITRCVDVNECDENPNF 91
>SB_54457| Best HMM Match : EGF (HMM E-Value=4.6e-31)
Length = 200
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -3
Query: 510 NGXCVAPPE--KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVC 385
NG C + +C CND + I+ E R C++ C C
Sbjct: 44 NGVCKEDLDSYRCECNDNYGGINCEARLNNNACQSSPCLNGGTC 87
>SB_22727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -3
Query: 519 KCTNGXCVAPPEKC----SCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNG 352
+CT+G C++ +C +C D +C + C +G C ++ LC+ + G
Sbjct: 281 QCTSGHCISGSSRCDSDYNCMDSSDEDGCKCFTNELTCSSGRC-VPSINLCDGVKDCEQG 339
Query: 351 TCRRKCG 331
+CG
Sbjct: 340 LDELRCG 346
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 447 GECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHDCGQENTFSGDRLGKN 277
G +CR+ +G+ + +V C+ S ++ G C G + C + FSG+ N
Sbjct: 197 GGFNCLCRHGYSGITCEVDVNECSSSPCVNGGVCADGLGEYKCICPSGFSGENCQVN 253
>SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20)
Length = 772
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 480 CSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKC 334
C+ FS C S C+NG C + N+ C+ F +G+ +C
Sbjct: 78 CAIKPTFSFPGHSCGSGEFQCDNGKCIRKNL-YCDGDFACVDGSDETRC 125
>SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30)
Length = 351
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 429 CRNCENGVCSK-DNVCLCNESFEMH-NGTCRRKCGHHDCGQENTFSGDRLG 283
C+ E G K ++V C+ S H N TC G ++C + GD LG
Sbjct: 142 CKMREGGKTYKCEDVNECDTSNPCHVNATCTNTVGSYECSCKPGLVGDGLG 192
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCL 382
+C+C +S G+ C +CE G+C + CL
Sbjct: 484 QCTCTRKYS---GKYCEECPSCEGGICRRSEDCL 514
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 11/68 (16%)
Frame = -3
Query: 516 CTNGXCVAPPEKC-----SCNDGFSLIDGECRSVCRNCENGVCSK-----DNVCLCNESF 367
C NG CV +C SC DG C C +G C + D C + F
Sbjct: 666 CNNGECVTKTSRCNGMRDSCVDGSDESGCTCGLHEFQCSSGECIEVATFCDGKKDCGDGF 725
Query: 366 -EMHNGTC 346
E H G+C
Sbjct: 726 DETHCGSC 733
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -3
Query: 474 CNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCG 331
C GF D C C + DN C + ++N C++ CG
Sbjct: 1180 CGTGFFPQDKMCVQCASPCFTCSGTADNCTGCGSNQVLNNNKCQKTCG 1227
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = -3
Query: 510 NGXCVAPPEKCSCNDGFSLIDGE---CRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRR 340
NG C+ C C G++ D CR V G C NVC C F + G
Sbjct: 2261 NGDCIG--STCFCYRGWTGHDCSQFHCRDVHECSGFGTCVGPNVCKCMTGF-LGRGCTYS 2317
Query: 339 KCGHH 325
CG +
Sbjct: 2318 YCGKY 2322
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 27.9 bits (59), Expect = 5.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 480 CSCNDGFSLIDGECR 436
C C +G+ ++DGEC+
Sbjct: 150 CVCKNGYQIVDGECK 164
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -3
Query: 486 EKCSCNDGFSLID--GECRSVCRNCENGV-CSKDN-VCLCNESFEMHNGTC 346
EK SC +G +D VC+ GV C D+ +C N S HNGTC
Sbjct: 1884 EKDSCLNGGLCVDKTNGFICVCKEPFIGVNCDTDDTICRQNASICPHNGTC 1934
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 516 CTNGXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRK 337
C N V C + ++ + +VC N N + +NVC NE+ +N TC +K
Sbjct: 3452 CKNNVNVCENNVNVCENNENVCENNL-NVCENNLNVCENNENVCENNENVCENNLTCNQK 3510
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 362 ISKLSLHKHTLSFEQTPFSQFLQTDL 439
I+K + KH+LS + TPF Q L+ D+
Sbjct: 234 ITKSARCKHSLSSDLTPFIQILRVDI 259
>SB_7514| Best HMM Match : OATP (HMM E-Value=0)
Length = 763
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = -3
Query: 501 CVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGHHD 322
C + P C+ G + C + CR + D CL + +G CR CG+++
Sbjct: 529 CSSLPYSPICSGGVTYYSS-CHAGCRARDVNGSLADCSCLSPADGVLKDGKCRSPCGYNN 587
>SB_2014| Best HMM Match : MAM (HMM E-Value=0)
Length = 2282
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 519 KCTNGXCVAPPEKC----SCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNG 352
+CT+G C++ +C +C D +C + C +G C + ++ LC+ + G
Sbjct: 215 QCTSGHCISGSSRCDGDYNCMDRSDEDGCKCFTNELTCSSGRCVQ-SINLCDGVRDCEYG 273
Query: 351 TCRRKCG 331
+CG
Sbjct: 274 LDELRCG 280
>SB_44578| Best HMM Match : PAN (HMM E-Value=0.00021)
Length = 257
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -3
Query: 465 GFSLIDGE-CRSVCRNC-ENGVCSKDNVCLCNESFEMHNGTCRRK 337
G+ L+D + C+SV + +NG+C +N CN++ ++ + +C K
Sbjct: 36 GYCLLDDKRCKSVNYSARDNGICQLNNATECNKAKKIRS-SCPSK 79
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -3
Query: 519 KCTNGXCVAPPEKCS----CNDGFSLIDGECRSVCRN---CENGVCSKDNVCLCNESFEM 361
KC +G CV P + C+ C DG + C + C + C +G C ++ CN +
Sbjct: 80 KCPDGKCVHPSKFCNGESDCTDGSD--EWSCDNSCSSRHACADGTCVTWSL-TCNGVSDC 136
Query: 360 HNGT 349
+G+
Sbjct: 137 QDGS 140
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 483 KCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKC 334
+C+ F+L EC CENG C K + LC+ +G+ + C
Sbjct: 169 RCAVQPPFALPGHECLEDEFGCENGQCVKRGL-LCDGDKACLDGSDEKHC 217
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +3
Query: 264 TLTYCSFQDDHR*RYFLDHNRDVRIFVCRYRCASRSSHCTSTHYPLSKHHFHSFYKQTCI 443
T Y F H Y + + + +Y ++H ++H H + T
Sbjct: 967 TTRYTMFTHSHTACYTMHYYTLTTRYTIQYDTVHHVHASYNSH--TARHTMHYYTLTTRY 1024
Query: 444 PHQSD*IHHCRSTFL--VAPHXLHSYTL 521
Q D +HH +++ A H +H YTL
Sbjct: 1025 TIQYDTVHHVHASYNSHTARHTMHYYTL 1052
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Frame = -3
Query: 516 CTNGXC--VAPPEKCSCNDGFSLIDGECRSVCRN--------CENGVCSKDN---VCLCN 376
C +G C + C CN G+ L D + V N C NG C C C+
Sbjct: 182 CDHGMCKNMNGSFSCVCNQGYHLTDNKRTCVDMNECILGKGLCGNGTCINTEGSYRCECH 241
Query: 375 ESFEMHNG 352
F+++ G
Sbjct: 242 PGFKLNRG 249
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 16/73 (21%)
Frame = -3
Query: 483 KCSCNDGFSLID--------GECRSVCRNCENGVCSKDNV--CLCNESFEMHNG--TC-- 346
KCSCN GF L EC+S + C G + C C + + + TC
Sbjct: 731 KCSCNPGFVLASDNFGCLDINECKSSIKYCSQGCKNLYGTFSCFCYRGYALDSDKRTCID 790
Query: 345 RRKC--GHHDCGQ 313
+C G H C Q
Sbjct: 791 VEECSSGAHGCSQ 803
>SB_37547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 486 EKCSCNDGFSLIDGECRSV--CRNCENGVCSKDNVCL 382
E+C C DGF C + C G C +C+
Sbjct: 259 EQCKCGDGFLRKGAACLPINPCHGANRGGCEGRAICV 295
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -3
Query: 507 GXCVAPPEKCSCNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCRRKCGH 328
G CV SC D + +D +C+ V D C+ N M+ GTC+ K
Sbjct: 558 GWCV---NAISCKDNGNSVDCQCKPGFTGANCAVDIHD--CVNNPC--MNGGTCKDKVND 610
Query: 327 HDCGQENTFSG 295
+C + F+G
Sbjct: 611 FECFCKPGFTG 621
>SB_20425| Best HMM Match : EGF_CA (HMM E-Value=1.2e-20)
Length = 144
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 474 CNDGFSLIDGECRSVCRNCENGVCSKDNVCLCNESFEMHNGTCR--RKC-GHHDCGQENT 304
C +G + + +VCRN G + C + FE NG C +C G Q T
Sbjct: 5 CREGLARC--QLGTVCRNLAGGYRCEGVAIRCQQGFEPVNGKCEDINECTGDGKVCQPGT 62
Query: 303 FSGDRLG 283
+R+G
Sbjct: 63 VCVNRVG 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,899
Number of Sequences: 59808
Number of extensions: 273347
Number of successful extensions: 2000
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -