Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305F02f
         (451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   312   2e-85
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   312   2e-85
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   312   2e-85
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   312   2e-85
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   202   2e-52
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   3.8  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    28   6.7  
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    27   8.8  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    27   8.8  
AY051973-1|AAK93397.1|  316|Drosophila melanogaster LD43650p pro...    27   8.8  
AF176011-1|AAD52649.1|  316|Drosophila melanogaster mitochondria...    27   8.8  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    27   8.8  
AE014296-29|AAN11421.1|  316|Drosophila melanogaster CG6851-PC, ...    27   8.8  
AE014296-28|AAN11420.1|  316|Drosophila melanogaster CG6851-PB, ...    27   8.8  
AE014296-27|AAF47342.1|  316|Drosophila melanogaster CG6851-PA, ...    27   8.8  
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.    27   8.8  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  312 bits (765), Expect = 2e-85
 Identities = 140/148 (94%), Positives = 145/148 (97%)
 Frame = +3

Query: 3   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
           GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLS
Sbjct: 2   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLS 61

Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
           SEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK
Sbjct: 62  SEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121

Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
           PQGTVARVRIGQPIMSVRSSDR+K  V+
Sbjct: 122 PQGTVARVRIGQPIMSVRSSDRYKAQVI 149


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  312 bits (765), Expect = 2e-85
 Identities = 140/148 (94%), Positives = 145/148 (97%)
 Frame = +3

Query: 3   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
           GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLS
Sbjct: 2   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLS 61

Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
           SEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK
Sbjct: 62  SEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121

Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
           PQGTVARVRIGQPIMSVRSSDR+K  V+
Sbjct: 122 PQGTVARVRIGQPIMSVRSSDRYKAQVI 149


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  312 bits (765), Expect = 2e-85
 Identities = 140/148 (94%), Positives = 145/148 (97%)
 Frame = +3

Query: 3   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
           GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLS
Sbjct: 15  GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLS 74

Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
           SEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK
Sbjct: 75  SEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 134

Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
           PQGTVARVRIGQPIMSVRSSDR+K  V+
Sbjct: 135 PQGTVARVRIGQPIMSVRSSDRYKAQVI 162


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  312 bits (765), Expect = 2e-85
 Identities = 140/148 (94%), Positives = 145/148 (97%)
 Frame = +3

Query: 3   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
           GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLS
Sbjct: 21  GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLS 80

Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
           SEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK
Sbjct: 81  SEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 140

Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
           PQGTVARVRIGQPIMSVRSSDR+K  V+
Sbjct: 141 PQGTVARVRIGQPIMSVRSSDRYKAQVI 168


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  202 bits (492), Expect = 2e-52
 Identities = 103/148 (69%), Positives = 111/148 (75%)
 Frame = +3

Query: 3   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
           GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLS
Sbjct: 8   GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLS 67

Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
           SEALEAGRICCNK ++   G D+    MR                          GAFGK
Sbjct: 68  SEALEAGRICCNK-MLSCAGADRLQTGMR--------------------------GAFGK 100

Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
           PQGTVARVRIGQPIMSVRSSDR+K  V+
Sbjct: 101 PQGTVARVRIGQPIMSVRSSDRYKAQVI 128


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 198 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 58
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 156 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 34
           P+ R V S   S+S  S P    G  D   PD+ SI++  Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452


>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +3

Query: 51   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 212
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 213  CNKYLVKNCGKDQFHI 260
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +3

Query: 51   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 212
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 213  CNKYLVKNCGKDQFHI 260
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>AY051973-1|AAK93397.1|  316|Drosophila melanogaster LD43650p
           protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 273 HPFHVIRINKMLSCAGADRLQTGMRGA 353
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AF176011-1|AAD52649.1|  316|Drosophila melanogaster mitochondrial
           carrier homolog protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 273 HPFHVIRINKMLSCAGADRLQTGMRGA 353
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +3

Query: 51   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 212
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 213  CNKYLVKNCGKDQFHI 260
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>AE014296-29|AAN11421.1|  316|Drosophila melanogaster CG6851-PC,
           isoform C protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 273 HPFHVIRINKMLSCAGADRLQTGMRGA 353
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-28|AAN11420.1|  316|Drosophila melanogaster CG6851-PB,
           isoform B protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 273 HPFHVIRINKMLSCAGADRLQTGMRGA 353
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-27|AAF47342.1|  316|Drosophila melanogaster CG6851-PA,
           isoform A protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 273 HPFHVIRINKMLSCAGADRLQTGMRGA 353
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
          Length = 1990

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -2

Query: 156 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 34
           P  R V S   S+S  S P    G  D   PD+ SI++  Y C
Sbjct: 410 PGPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,687,292
Number of Sequences: 53049
Number of extensions: 527074
Number of successful extensions: 1615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)