Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F02f
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 247 3e-66
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 28 2.7
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 2.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 4.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 4.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 4.8
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 6.3
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 27 8.3
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 27 8.3
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 27 8.3
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 27 8.3
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 27 8.3
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 247 bits (605), Expect = 3e-66
Identities = 112/148 (75%), Positives = 123/148 (83%)
Frame = +3
Query: 3 GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 182
GRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E LS
Sbjct: 2 GRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLS 61
Query: 183 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 362
SEALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GK
Sbjct: 62 SEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGK 121
Query: 363 PQGTVARVRIGQPIMSVRSSDRWKGHVV 446
PQG VARV IG + S+R + H +
Sbjct: 122 PQGLVARVDIGDILFSMRIKEGNVKHAI 149
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 14 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 103
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1042 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1071
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical protein
F36H1.2b protein.
Length = 1379
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 14 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 103
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical protein
F36H1.2a protein.
Length = 1398
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 14 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 103
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 431 PPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 312
P VT A + LSN T ST LA T +L P+S A
Sbjct: 47 PVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 364 GLPNAPRIPVWSLSAPA 314
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 60 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 206
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 122 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 21
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 122 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 21
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 122 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 21
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 285 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 109
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 108 PNRR 97
+++
Sbjct: 1937 HHQK 1940
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 285 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 109
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 700 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 757
Query: 108 PNRR 97
+++
Sbjct: 758 HHQK 761
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 285 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 109
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 108 PNRR 97
+++
Sbjct: 1937 HHQK 1940
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 345 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKGHVV 446
R GKP +A+ G+ I + + D W G V
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPV 261
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 427 LSLERTDMMGCPMRTRATVP*GLPNAPRIP 338
L++E TD++G P RT+A + N+ IP
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,849,661
Number of Sequences: 27780
Number of extensions: 261583
Number of successful extensions: 781
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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