Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305F01f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051457-1|AAK92881.1| 236|Drosophila melanogaster GH12681p pro... 78 8e-15
AE013599-980|AAF58867.1| 236|Drosophila melanogaster CG12131-PA... 78 8e-15
AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p pro... 32 0.54
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 32 0.54
M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein... 28 6.7
AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p pro... 28 6.7
AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA... 28 6.7
AY118883-1|AAM50743.1| 475|Drosophila melanogaster HL01686p pro... 28 8.8
AY069852-1|AAL39997.1| 407|Drosophila melanogaster SD10272p pro... 28 8.8
AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesp... 28 8.8
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 28 8.8
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 28 8.8
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 28 8.8
>AY051457-1|AAK92881.1| 236|Drosophila melanogaster GH12681p
protein.
Length = 236
Score = 77.8 bits (183), Expect = 8e-15
Identities = 48/144 (33%), Positives = 66/144 (45%)
Frame = +3
Query: 90 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 269
PT A+ NKWEGEDED+++ + K+
Sbjct: 17 PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76
Query: 270 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 449
K ++P +KLAEKLR QK+QE SDL+ A E FGVT G LD F+P
Sbjct: 77 EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNP 130
Query: 450 TTKEEYTEFADLLTKKITFYKAKD 521
TKEE+ EF L+ K+ ++ +
Sbjct: 131 ETKEEFKEFGATLSWKVGQFRESE 154
>AE013599-980|AAF58867.1| 236|Drosophila melanogaster CG12131-PA
protein.
Length = 236
Score = 77.8 bits (183), Expect = 8e-15
Identities = 48/144 (33%), Positives = 66/144 (45%)
Frame = +3
Query: 90 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 269
PT A+ NKWEGEDED+++ + K+
Sbjct: 17 PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76
Query: 270 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 449
K ++P +KLAEKLR QK+QE SDL+ A E FGVT G LD F+P
Sbjct: 77 EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNP 130
Query: 450 TTKEEYTEFADLLTKKITFYKAKD 521
TKEE+ EF L+ K+ ++ +
Sbjct: 131 ETKEEFKEFGATLSWKVGQFRESE 154
>AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p
protein.
Length = 565
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 291 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 401
L+ +K EE E+KL EK RQ+KL+E E + +L ET
Sbjct: 42 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 79
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 291 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 401
L+ +K EE E+KL EK RQ+KL+E E + +L ET
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 682
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAME 398
E+ +E E+KL EKLR++K++E E + +L E
Sbjct: 566 EEKIKEKEREEKLKEKLREEKIKEKEKEEKLRKE 599
>M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 502 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 335
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 334 FCSGVIS 314
V S
Sbjct: 257 VVEEVFS 263
>AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 502 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 335
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 334 FCSGVIS 314
V S
Sbjct: 257 VVEEVFS 263
>AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 502 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 335
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 334 FCSGVIS 314
V S
Sbjct: 257 VVEEVFS 263
>AY118883-1|AAM50743.1| 475|Drosophila melanogaster HL01686p
protein.
Length = 475
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 323 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 354
>AY069852-1|AAL39997.1| 407|Drosophila melanogaster SD10272p
protein.
Length = 407
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 323 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 354
>AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesprin
splice variant protein.
Length = 400
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 199 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 230
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 323 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 354
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 7660 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 7691
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EKTAEEMTPEQKLAEKLRQQKLQEESDLRLAM 395
E+T ++ Q+ + LRQ+ +QEE LRL M
Sbjct: 7660 EQTLAQIDVYQQQMQSLRQRIIQEEQQLRLVM 7691
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,035
Number of Sequences: 53049
Number of extensions: 275997
Number of successful extensions: 1349
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -