Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E12f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 5.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 5.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 5.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 5.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 5.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 5.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 5.0
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 6.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 21 6.6
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 96 SSGLTSPLSVSTSPPGKPATSTASQ 120
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 SKFLRSHVVITVAPPFKPKRITASR 305
S L S + ++ +PP KP TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 212 WMQKATEHVIGCVLCSP 228
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 526 WMQKATEHVIGCVLCSP 542
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 786 WLQKATEHVIGCVLCSP 802
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 786 WLQKATEHVIGCVLCSP 802
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 759 WMQKATEHVIGCVLCSP 775
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 759 WMQKATEHVIGCVLCSP 775
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 786 WLQKATEHVIGCVLCSP 802
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 171 WALVTTSHQVGCELVHP 121
W T H +GC L P
Sbjct: 786 WLQKATEHVIGCVLCSP 802
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 354 GRFLKKLFININIFISAVK 298
GRF+ K+ + +N F S ++
Sbjct: 245 GRFVIKILVALNFFTSTLE 263
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,107
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -