BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305E12f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41121| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_15066| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_4685| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76 SB_3642| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_3304| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76 SB_36113| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_32933| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_5379| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 31 0.76 SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 29 3.1 SB_14798| Best HMM Match : zf-CCHC (HMM E-Value=0.00014) 28 5.4 SB_55062| Best HMM Match : MFS_1 (HMM E-Value=0.016) 27 7.1 SB_4252| Best HMM Match : zf-CCHC (HMM E-Value=0.00032) 27 7.1 >SB_41121| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 550 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 147 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 177 >SB_15066| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 338 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 277 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 307 >SB_4685| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 314 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 101 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 131 >SB_3642| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 283 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 222 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 252 >SB_3304| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 285 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 31 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 61 >SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2211 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 1235 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 1265 >SB_36113| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 283 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 222 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 252 >SB_32933| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 92 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 31 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 61 >SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 799 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 222 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 252 >SB_5379| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 285 Score = 30.7 bits (66), Expect = 0.76 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + V N + Sbjct: 31 CGVVGHFAKSKFCRLVRPENNSQSSRVRNGS 61 >SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 1131 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF RL+ +N Q + N + Sbjct: 303 CGVVGHFAKSKFCRLVRPENNSQSSRCRNGS 333 >SB_14798| Best HMM Match : zf-CCHC (HMM E-Value=0.00014) Length = 377 Score = 27.9 bits (59), Expect = 5.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPNSA 3 CGVVGH +KF R + +N Q + V N + Sbjct: 158 CGVVGHFAKSKFCRPVRPENNSQSSRVRNGS 188 >SB_55062| Best HMM Match : MFS_1 (HMM E-Value=0.016) Length = 556 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 348 IFLWRLSFGSSWPL*NFSIKICKFCRYV 431 I LWRL NFSIK+ ++C Y+ Sbjct: 45 IQLWRLRMVPELSWTNFSIKLVRYCMYM 72 >SB_4252| Best HMM Match : zf-CCHC (HMM E-Value=0.00032) Length = 129 Score = 27.5 bits (58), Expect = 7.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 95 CGVVGHQVGTKFLRLM*KRHNLQKNLVPN 9 C VVGH +KF RL+ +N Q + V N Sbjct: 83 CAVVGHFAKSKFCRLVRPENNPQSSRVRN 111 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,613,683 Number of Sequences: 59808 Number of extensions: 299360 Number of successful extensions: 630 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 630 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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