Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   0.88 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.2  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   8.2  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +1

Query: 19  RFFCKLCRFYISRRN--FVPTWCPTTPH--N*FFFYCLWVDELTAHLV 150
           +++C  C  Y++  +     T C    H  N  F+Y  W++E   HL+
Sbjct: 3   KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLI 50


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 16  TRFFCKLCRFYISRRNFVPTW 78
           T  FC+L +  +SR  F P W
Sbjct: 524 TEEFCRLYQDCLSRGTFPPQW 544


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 63  VPSANVETTQFAKKPRAEFG 4
           +P   ++TT  A+KP A+ G
Sbjct: 400 IPKFRIDTTSRAEKPLAKLG 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,363
Number of Sequences: 2352
Number of extensions: 9518
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)