Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3477|AAF51682.1|  314|Drosophila melanogaster CG12976-P...    32   0.54 
BT029280-1|ABK30917.1| 1191|Drosophila melanogaster IP14007p pro...    29   5.1  
AE014296-2642|AAF49534.1| 1191|Drosophila melanogaster CG12272-P...    29   5.1  
BT006027-1|AAO85561.1|  419|Drosophila melanogaster LD10519p pro...    28   8.8  
AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A pro...    28   8.8  
AE014135-166|ABC65831.1|  419|Drosophila melanogaster CG11081-PE...    28   8.8  
AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD...    28   8.8  
AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA...    28   8.8  

>AE014296-3477|AAF51682.1|  314|Drosophila melanogaster CG12976-PA
           protein.
          Length = 314

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 509 SQDNPAYSGKVPINHLKIEDVSKVKQYIPAEFTNFYRE 396
           SQ  P YSG+ P+N + +E  S V  + PA+  ++  E
Sbjct: 250 SQSTPVYSGEYPVN-MSVESASCVPYHCPADARDYEEE 286


>BT029280-1|ABK30917.1| 1191|Drosophila melanogaster IP14007p
           protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 473 INHLKIEDVSKVKQYIPAEFTNFYREILQ 387
           IN  + ED+  V  Y   E  NF R +LQ
Sbjct: 621 INQARSEDLVSVSNYYSTELANFLRRVLQ 649


>AE014296-2642|AAF49534.1| 1191|Drosophila melanogaster CG12272-PA
           protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 473 INHLKIEDVSKVKQYIPAEFTNFYREILQ 387
           IN  + ED+  V  Y   E  NF R +LQ
Sbjct: 621 INQARSEDLVSVSNYYSTELANFLRRVLQ 649


>BT006027-1|AAO85561.1|  419|Drosophila melanogaster LD10519p
           protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 74  PGVPRHHIISFFFIAYGWTSSQPTWCEVVTKAHRHLQR 187
           PG P+H + +  ++   +T++ P   E+   A R L++
Sbjct: 194 PGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEK 231


>AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A
           protein.
          Length = 1945

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 74  PGVPRHHIISFFFIAYGWTSSQPTWCEVVTKAHRHLQR 187
           PG P+H + +  ++   +T++ P   E+   A R L++
Sbjct: 194 PGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEK 231


>AE014135-166|ABC65831.1|  419|Drosophila melanogaster CG11081-PE,
           isoform E protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 74  PGVPRHHIISFFFIAYGWTSSQPTWCEVVTKAHRHLQR 187
           PG P+H + +  ++   +T++ P   E+   A R L++
Sbjct: 194 PGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEK 231


>AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD,
           isoform D protein.
          Length = 1945

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 74  PGVPRHHIISFFFIAYGWTSSQPTWCEVVTKAHRHLQR 187
           PG P+H + +  ++   +T++ P   E+   A R L++
Sbjct: 194 PGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEK 231


>AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA,
           isoform A protein.
          Length = 1945

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 74  PGVPRHHIISFFFIAYGWTSSQPTWCEVVTKAHRHLQR 187
           PG P+H + +  ++   +T++ P   E+   A R L++
Sbjct: 194 PGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEK 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,627,421
Number of Sequences: 53049
Number of extensions: 449926
Number of successful extensions: 659
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)