Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 73 1e-13
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 72 3e-13
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 64 7e-11
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 62 4e-10
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 61 5e-10
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 45 3e-05
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 37 0.012
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.44
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 27 7.1
SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 235 LGSSIKSDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
L ++ + + DK ++ LDV+++ PEEIS+K G I ++GKH+ + +HGY + +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSEFHRSY 87
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAVE 513
LP+G +V SR++ DG+L + A + P E
Sbjct: 88 NLPDGVDVSTVSSRITGDGLLHIEALKAEPQETE 121
Score = 27.9 bits (59), Expect(2) = 0.059
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 403 RRYALPEGCTAESVESRLSSDGVLSVIAPRXVPP 504
R + LP+ +S+ SRL DG L + A R + P
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHP 194
Score = 25.4 bits (53), Expect(2) = 0.059
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 214 LAAAARDLGSSIKSDKDKFQVNLDVQHFAPE 306
+ A+ G K D +F V LDV F+P+
Sbjct: 125 VGASTGSAGDIAKIDDKRFTVTLDVSSFSPD 155
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 DKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCT 432
D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 433 AESVESRLSSDGVLSVIAPRXVPPA 507
S+ +R++ DG+L V A + PPA
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPA 85
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCT 432
D KF + LDV F PEE+ VK + V + E ++HG+ + RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVD 153
Query: 433 AESVESRLSSDGVLSVIAPR 492
+++ RL DGVL + A +
Sbjct: 154 MDTLVPRLGKDGVLYIEADK 173
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 430 TAESVESRLSSDGVLSVIAPRXVPPAVEGE 519
A +V++R+S+ G L + A + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +1
Query: 232 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
LP +S+ +RL +G L A + PA+
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 178
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 430 TAESVESRLSSDGVLSVIAPRXVPPAVEGE 519
A +V++R+S+ G L + A + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +1
Query: 232 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
LP +S+ +RL +G L A + PA+
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 178
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 64.1 bits (149), Expect = 7e-11
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 430 TAESVESRLSSDGVLSVIAPRXVPPAVEGE 519
A +V++R+S+ G L + A + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 262 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAE 438
D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 439 SVESRLSSDGVLSVIAPRXVPPAVEGE 519
+V++R+S+ G L + A + +P GE
Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGE 324
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +1
Query: 232 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
LP +S+ +RL +G L A + PA+
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 178
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +1
Query: 232 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 379
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
LP +S+ +RL +G L A + PA+
Sbjct: 380 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 412
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 64.1 bits (149), Expect = 7e-11
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 430 TAESVESRLSSDGVLSVIAPRXVPPAVEGE 519
A +V++R+S+ G L + A + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +1
Query: 232 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 411
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 412 ALPEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
LP +S+ +RL +G L A + PA+
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 178
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLS 459
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 460 SDGVLSVIAPRXVP-PAVEGE 519
+ G L + A + +P P E E
Sbjct: 71 NHGHLHIEARKALPKPEAELE 91
Score = 57.6 bits (133), Expect = 6e-09
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +1
Query: 250 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
K+ +DKF + +DV F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 430 TAESVESRLSSDGVLSVIAPRXVPPAV 510
+S+ +RL +G L A + V PA+
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSVAPAL 177
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 429
++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 61
Query: 430 TAESVESRLSSDGVLSVIAPRXVP 501
A +V++R+S+ G L + A + +P
Sbjct: 62 EASNVKTRISNHGQLHIEAMKALP 85
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/91 (31%), Positives = 48/91 (52%)
Frame = +1
Query: 238 GSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYAL 417
G+ +S DKF + +DV+ F PE I V+ ++V HE + + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 418 PEGCTAESVESRLSSDGVLSVIAPRXVPPAV 510
P +S+ +RL +G L A + PA+
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKRNAPAL 178
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 223 AARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQF 399
A ++ S+ D KF + LDV F PEE+ VK + V + E ++HG+ +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQF 70
Query: 400 TRRYALPE 423
R + LP+
Sbjct: 71 NRHFVLPQ 78
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/82 (23%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 250 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEG 426
++DK+ ++ ++V+ FA +++S++ ++++G+ +K D G+ RQF R P+
Sbjct: 94 QNDKNGIKLEMNVRGFAAKDVSLQVDGQDLIIKGEKMDKDD--GWCKMRQFCWRRRFPKS 151
Query: 427 CTAESVESRLSSDGVLSVIAPR 492
+S+++ L +L + A +
Sbjct: 152 TDMKSIKATLKYGDILEIEAQK 173
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 352 KHEEKKDQHGYISRQFTRRYAL 417
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 316 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 423
+++A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 249 DTGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQ 133
D A V + S V+ FS H G+ CST + ++P+
Sbjct: 154 DVLAAVKTPVSPVSSNGTAFSEHGGSPCSTPTVSSAEPR 192
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 244 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEE-----KKDQHGYISRQFTRR 408
+I S +DK + + HFA E+ V+ YI E E +K Q +QF +
Sbjct: 1368 AIDSVRDKGEQLISCGHFAASEVEVRIEALYIQWEELLEASATKGRKLQEARDHQQFNQE 1427
Query: 409 YALPEGCTAESVESRLSSD 465
+ + C + LSSD
Sbjct: 1428 VDIADSCITDKETIVLSSD 1446
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 441 RFSRTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDF-FRGEML 289
RF+ + S + L Y +L+F ++F +N +FNR F F+ E++
Sbjct: 303 RFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKELM 354
>SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 487 VRLQTTHHLKTAGTPQIQPYSP 422
VR +T HH K P I+PY P
Sbjct: 29 VRERTGHHKKCGALPSIKPYLP 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,283,730
Number of Sequences: 59808
Number of extensions: 385490
Number of successful extensions: 1127
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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