Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E09f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 34 0.082
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 30 1.0
SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 29 3.1
SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 29 3.1
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 28 4.1
SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4) 28 5.4
SB_14699| Best HMM Match : VAR1 (HMM E-Value=2) 28 5.4
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05) 27 9.4
SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13) 27 9.4
SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07) 27 9.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.4
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 33.9 bits (74), Expect = 0.082
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS L+ S+SSL T++SS T+ S LS T SDF +
Sbjct: 817 SSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSS 876
Query: 337 SLPSKLIVALTSRRRLPNEGS 275
SLPS + + +S P S
Sbjct: 877 SLPSDFLTSSSSLSVFPTSSS 897
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = -2
Query: 511 LRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSL 332
L S++ +FLT S+SSL T++SS T+ S LS T SDF + SL
Sbjct: 558 LTSSSSLSVFLT----SSSSLSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPSDFLTSSSL 613
Query: 331 PSKLIVALTSRRRLPNEGS 275
PS + + +S P S
Sbjct: 614 PSDFLTSSSSLSVFPTSSS 632
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS + S+SSL T++SS T+ SL S T + SDF +
Sbjct: 622 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSSPSDFLSSS 681
Query: 337 SLPSKLIVA 311
SLPS + +
Sbjct: 682 SLPSDFLTS 690
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS + S+SSL T++SS T+ SL S T + SDF +
Sbjct: 1217 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSSPSDFLSSS 1276
Query: 337 SLPSKLIVA 311
SLPS + +
Sbjct: 1277 SLPSDFLTS 1285
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL TS L+ S+SSL T+ SS T+ S LS T SDF +
Sbjct: 422 SSLSDFLTSSSSLSDFLTSSSSLSDFLTSCSSLSDFLTSSSSLSVFPTPSSLPSDFLTSS 481
Query: 337 SLPSKLIVALTS 302
SLPS + + +S
Sbjct: 482 SLPSDFLTSSSS 493
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS + S+SSL T++S T+ S LS T SDF +
Sbjct: 1147 SSLSVFLTSSSLPSDFLTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSS 1206
Query: 337 SLPSKLIVALTSRRRLPNEGS 275
SLPS + + +S P S
Sbjct: 1207 SLPSDFLTSSSSLSVFPTSSS 1227
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS + S+SSL T++SS T+ SL S T SDF +
Sbjct: 887 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFVTSSSLPSDFLTSS 946
Query: 337 SLPSKLI 317
SLPS +
Sbjct: 947 SLPSDFL 953
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -2
Query: 463 STSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSLPSKLIVALTS 302
S+SSL T++SS T+ S LS T SDF + SLPS + + +S
Sbjct: 490 SSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLTSSSS 543
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -2
Query: 463 STSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSLPSKLIVALTS 302
S+SSL T++SS T+ S LS T SDF + SLPS + + +S
Sbjct: 735 SSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLTSSSS 788
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS L+ S+SSL T++SS T+ S LS T + S F +
Sbjct: 807 SSLSVFLTSSSSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSS 866
Query: 337 SLPSKLIVA 311
SLPS + +
Sbjct: 867 SLPSDFLTS 875
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL TS L+ S+SSLR T++SS T+ SLLS + + SDF +
Sbjct: 1007 SSLSDFLTSSSSLSDFLTSSSSLRVFLTSSSSLSDFLTSSSLLSDFISSSSSLSDFLTSS 1066
Query: 337 SLPSKLIVALTS 302
S S + + +S
Sbjct: 1067 SSLSDFLTSSSS 1078
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = -2
Query: 511 LRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSL 332
L LS+ FLT S+SSL T++SS T+ S LS T + SDF + S
Sbjct: 793 LTLSSLLSDFLT----SSSSLSVFLTSSSSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSS 848
Query: 331 PSKLIVALTSRRRLPNEGS 275
S + + +S P S
Sbjct: 849 LSDFLTSSSSLSVFPTSSS 867
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL + TS L+ S+SSL T++S T+ SL S T + S F +
Sbjct: 572 SSLSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSS 631
Query: 337 SLPSKLIVALTS 302
SLPS + + +S
Sbjct: 632 SLPSDFLTSSSS 643
Score = 27.1 bits (57), Expect = 9.4
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = -2
Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338
SSL TS L+ S+SSL T +SS T+ SL S T + SDF +
Sbjct: 1117 SSLSDFLTSSSSLSDFLTSSSSLSDFLTWSSSLSVFLTSSSLPSDFLTSSSSLSDFLTSS 1176
Query: 337 SLPSKLIVALTSRRRLPNEGS 275
SL S + + +S P S
Sbjct: 1177 SLLSDFLTSSSSLSVFPTSSS 1197
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Frame = +3
Query: 255 PSHTGRSEPSFGRRRRDVNATISF-----EGNDTVIPKSEDANKTVDKPDN-----NEGA 404
P GR + + +V AT+ EG + +EDAN T + DN N G
Sbjct: 409 PVVAGRPKDVWKAMEPEVRATVQEHIARDEGESPSLEDAEDANPTPESMDNQADVDNTGL 468
Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEV 497
V + ++ V +YLKD V + + + + V
Sbjct: 469 VNDIGRQQVIV-QYLKDYVSFQTEMERAVPV 498
>SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 264 TGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443
T R E + + + I E N+ + +E++ + D+ D KVS E+ +D
Sbjct: 44 TARDEYRIKADQLERDVEILNEKNEQLQGLAEESQQLKDEMDVLRHMQEKVSKYESTIDM 103
Query: 444 YLKDEVETPSHVRKMIEVFDNRN 512
Y K ++E S +RK ++ + +N
Sbjct: 104 Y-KKKLEELSDMRKQMKAMEEKN 125
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 276 EPSFGRRRRDVNATIS--FEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443
E + G + + N+T+ E N TV K + N TVDK V K + E + VDK
Sbjct: 863 EKATGDKGAEENSTVDKGTEENSTV-DKGAEENSTVDKGTEENSTVDKGAEENSTVDK 919
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 267 GRSEPSFGRRRRDVNATIS--FEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVD 440
G E S + + N+T+ E N TV K + N TVDK V K + E + VD
Sbjct: 870 GAEENSTVDKGTEENSTVDKGAEENSTV-DKGTEENSTVDKGAEENSTVDKGTEENSTVD 928
Query: 441 K 443
K
Sbjct: 929 K 929
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/99 (27%), Positives = 40/99 (40%)
Frame = +3
Query: 225 PNKYINNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGA 404
PN Y NN YC P+ + R D + EG D VI T DK D+N+G
Sbjct: 279 PNNYENNEYCTWEI--RVPTGKKVRLDFTELRTEEGKDLVI-----IYDTGDKDDDNDGD 331
Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521
+Y + D Y D+ + + +V R ++
Sbjct: 332 DDDYNYND---DDYGDDDNDDDDDEKDNEDVMTKRMTMM 367
>SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 333 NDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDKYLKDEVE 464
+D + K + + VDK ++ +V KV+ ++ AVDK +D+++
Sbjct: 89 DDMGVDKVSEDDTGVDKVGEDDKSVDKVAEDDIAVDKVAEDDMD 132
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/99 (27%), Positives = 40/99 (40%)
Frame = +3
Query: 225 PNKYINNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGA 404
PN Y NN YC P+ + R D + EG D VI T DK D+N+G
Sbjct: 1792 PNNYENNEYCTWEI--RVPTGKKVRLDFTELRTEEGKDLVI-----IYDTGDKDDDNDGD 1844
Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521
+Y + D Y D+ + + +V R ++
Sbjct: 1845 DDDYNYND---DDYGDDDNDDDDDEKDNEDVMTKRMTMM 1880
>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 539
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 330 GNDTVIPKSEDANKTVDKPDNNEGAVYK-VSYEEAAVDKYLKDEVETPSHVRKMIEVFDN 506
G + SED D PD+ EG VY+ +S + +D+ + +E+ H R ++D
Sbjct: 195 GEEVYEDMSEDKPHYTDVPDSGEGEVYEDLSGQGGILDEPM-EEMPGGYHSRPSYAIYDT 253
Query: 507 RNEL 518
+ L
Sbjct: 254 PSNL 257
>SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4)
Length = 241
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 327 EGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443
+G+ + + K +D +VDK D+ G+V K +VDK
Sbjct: 79 DGDSSSVDKGDDGGGSVDKGDDGGGSVDKGDDGGGSVDK 117
>SB_14699| Best HMM Match : VAR1 (HMM E-Value=2)
Length = 528
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 153 RREVSFLSLR*VDELTVMLSRYRSPNKYINNAYCPSHTGRSE 278
R + L LR D+L V+LS +SP Y+ + PS G E
Sbjct: 479 RPKPQVLILRPRDQLKVLLSYKKSPLSYVTSTGGPSLLGEEE 520
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 144 VIVRREVSFLSLR*VD-ELTVMLSRYRSPNKYINNAYCP 257
V+V++ + + LR + +L + +RYR P K N CP
Sbjct: 1030 VVVQKRIVLIKLRISNHKLEIEAARYRKPYKRANERICP 1068
>SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05)
Length = 1084
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 366 NKTVDKPDNNEGAVYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521
N + K D+N+ V V E + +D+ L+D + + K + V D E L
Sbjct: 177 NNALQKIDSNKDFVLVVFLESSIIDRALRDAIYNFHSLVKTVIVGDGSEERL 228
>SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13)
Length = 901
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +3
Query: 288 GRRRRDVNATISFEGND-----TVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDKYLK 452
G RDV +T +++G+D V+ K +D D N A+ + +Y+ V
Sbjct: 57 GEEARDVYSTFNWDGDDKNKIEPVLKKFGKLRVCLDPKDLNR-AILRENYQMPTV----- 110
Query: 453 DEVETPSHVRKMIEVFDNRN 512
+++ T H K+ V D RN
Sbjct: 111 EDIATRLHGAKVFTVLDVRN 130
>SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07)
Length = 1306
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 233 FIWAPVTT*HDREFVYSSKR*KRNLSPDNHMILGGIAHGH 114
FI P T H++E+ Y SK + + P N ++HGH
Sbjct: 257 FIRLPSYTWHEKEYWYRSKDPDKMILPLNVRPSETVSHGH 296
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 219 RSPNKYI--NNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDN 392
+ P K+I N +CP + EP G RRR V A + ++ E++N ++ ++
Sbjct: 1655 KPPIKHIPEGNWFCPDCRPK-EPRRGERRRKVPAQEESDSSEAESESEEESNSDTEEYEH 1713
Query: 393 NE 398
++
Sbjct: 1714 SD 1715
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,186,532
Number of Sequences: 59808
Number of extensions: 288257
Number of successful extensions: 847
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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