BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305E09f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 34 0.082 SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 30 1.0 SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 29 3.1 SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_8425| Best HMM Match : EGF (HMM E-Value=0) 29 3.1 SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 28 4.1 SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4) 28 5.4 SB_14699| Best HMM Match : VAR1 (HMM E-Value=2) 28 5.4 SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05) 27 9.4 SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13) 27 9.4 SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07) 27 9.4 SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.4 >SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) Length = 1494 Score = 33.9 bits (74), Expect = 0.082 Identities = 28/81 (34%), Positives = 38/81 (46%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS L+ S+SSL T++SS T+ S LS T SDF + Sbjct: 817 SSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSS 876 Query: 337 SLPSKLIVALTSRRRLPNEGS 275 SLPS + + +S P S Sbjct: 877 SLPSDFLTSSSSLSVFPTSSS 897 Score = 33.1 bits (72), Expect = 0.14 Identities = 27/79 (34%), Positives = 38/79 (48%) Frame = -2 Query: 511 LRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSL 332 L S++ +FLT S+SSL T++SS T+ S LS T SDF + SL Sbjct: 558 LTSSSSLSVFLT----SSSSLSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPSDFLTSSSL 613 Query: 331 PSKLIVALTSRRRLPNEGS 275 PS + + +S P S Sbjct: 614 PSDFLTSSSSLSVFPTSSS 632 Score = 29.9 bits (64), Expect = 1.3 Identities = 24/69 (34%), Positives = 34/69 (49%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS + S+SSL T++SS T+ SL S T + SDF + Sbjct: 622 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSSPSDFLSSS 681 Query: 337 SLPSKLIVA 311 SLPS + + Sbjct: 682 SLPSDFLTS 690 Score = 29.9 bits (64), Expect = 1.3 Identities = 24/69 (34%), Positives = 34/69 (49%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS + S+SSL T++SS T+ SL S T + SDF + Sbjct: 1217 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSSPSDFLSSS 1276 Query: 337 SLPSKLIVA 311 SLPS + + Sbjct: 1277 SLPSDFLTS 1285 Score = 29.5 bits (63), Expect = 1.8 Identities = 26/72 (36%), Positives = 34/72 (47%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL TS L+ S+SSL T+ SS T+ S LS T SDF + Sbjct: 422 SSLSDFLTSSSSLSDFLTSSSSLSDFLTSCSSLSDFLTSSSSLSVFPTPSSLPSDFLTSS 481 Query: 337 SLPSKLIVALTS 302 SLPS + + +S Sbjct: 482 SLPSDFLTSSSS 493 Score = 29.5 bits (63), Expect = 1.8 Identities = 26/81 (32%), Positives = 36/81 (44%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS + S+SSL T++S T+ S LS T SDF + Sbjct: 1147 SSLSVFLTSSSLPSDFLTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSS 1206 Query: 337 SLPSKLIVALTSRRRLPNEGS 275 SLPS + + +S P S Sbjct: 1207 SLPSDFLTSSSSLSVFPTSSS 1227 Score = 29.1 bits (62), Expect = 2.3 Identities = 24/67 (35%), Positives = 32/67 (47%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS + S+SSL T++SS T+ SL S T SDF + Sbjct: 887 SSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFVTSSSLPSDFLTSS 946 Query: 337 SLPSKLI 317 SLPS + Sbjct: 947 SLPSDFL 953 Score = 28.7 bits (61), Expect = 3.1 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -2 Query: 463 STSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSLPSKLIVALTS 302 S+SSL T++SS T+ S LS T SDF + SLPS + + +S Sbjct: 490 SSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLTSSSS 543 Score = 28.7 bits (61), Expect = 3.1 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -2 Query: 463 STSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSLPSKLIVALTS 302 S+SSL T++SS T+ S LS T SDF + SLPS + + +S Sbjct: 735 SSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLTSSSS 788 Score = 28.7 bits (61), Expect = 3.1 Identities = 24/69 (34%), Positives = 34/69 (49%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS L+ S+SSL T++SS T+ S LS T + S F + Sbjct: 807 SSLSVFLTSSSSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSS 866 Query: 337 SLPSKLIVA 311 SLPS + + Sbjct: 867 SLPSDFLTS 875 Score = 28.3 bits (60), Expect = 4.1 Identities = 25/72 (34%), Positives = 36/72 (50%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL TS L+ S+SSLR T++SS T+ SLLS + + SDF + Sbjct: 1007 SSLSDFLTSSSSLSDFLTSSSSLRVFLTSSSSLSDFLTSSSLLSDFISSSSSLSDFLTSS 1066 Query: 337 SLPSKLIVALTS 302 S S + + +S Sbjct: 1067 SSLSDFLTSSSS 1078 Score = 27.5 bits (58), Expect = 7.1 Identities = 26/79 (32%), Positives = 36/79 (45%) Frame = -2 Query: 511 LRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITVSL 332 L LS+ FLT S+SSL T++SS T+ S LS T + SDF + S Sbjct: 793 LTLSSLLSDFLT----SSSSLSVFLTSSSSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSS 848 Query: 331 PSKLIVALTSRRRLPNEGS 275 S + + +S P S Sbjct: 849 LSDFLTSSSSLSVFPTSSS 867 Score = 27.1 bits (57), Expect = 9.4 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL + TS L+ S+SSL T++S T+ SL S T + S F + Sbjct: 572 SSLSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSS 631 Query: 337 SLPSKLIVALTS 302 SLPS + + +S Sbjct: 632 SLPSDFLTSSSS 643 Score = 27.1 bits (57), Expect = 9.4 Identities = 27/81 (33%), Positives = 36/81 (44%) Frame = -2 Query: 517 SSLRLSNTSIIFLT*LGVSTSSLRYLSTAASSYDTL*TAPSLLSGLSTVLFASSDFGITV 338 SSL TS L+ S+SSL T +SS T+ SL S T + SDF + Sbjct: 1117 SSLSDFLTSSSSLSDFLTSSSSLSDFLTWSSSLSVFLTSSSLPSDFLTSSSSLSDFLTSS 1176 Query: 337 SLPSKLIVALTSRRRLPNEGS 275 SL S + + +S P S Sbjct: 1177 SLLSDFLTSSSSLSVFPTSSS 1197 >SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) Length = 623 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%) Frame = +3 Query: 255 PSHTGRSEPSFGRRRRDVNATISF-----EGNDTVIPKSEDANKTVDKPDN-----NEGA 404 P GR + + +V AT+ EG + +EDAN T + DN N G Sbjct: 409 PVVAGRPKDVWKAMEPEVRATVQEHIARDEGESPSLEDAEDANPTPESMDNQADVDNTGL 468 Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEV 497 V + ++ V +YLKD V + + + + V Sbjct: 469 VNDIGRQQVIV-QYLKDYVSFQTEMERAVPV 498 >SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 137 Score = 29.9 bits (64), Expect = 1.3 Identities = 21/83 (25%), Positives = 40/83 (48%) Frame = +3 Query: 264 TGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443 T R E + + + I E N+ + +E++ + D+ D KVS E+ +D Sbjct: 44 TARDEYRIKADQLERDVEILNEKNEQLQGLAEESQQLKDEMDVLRHMQEKVSKYESTIDM 103 Query: 444 YLKDEVETPSHVRKMIEVFDNRN 512 Y K ++E S +RK ++ + +N Sbjct: 104 Y-KKKLEELSDMRKQMKAMEEKN 125 >SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1280 Score = 29.5 bits (63), Expect = 1.8 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +3 Query: 276 EPSFGRRRRDVNATIS--FEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443 E + G + + N+T+ E N TV K + N TVDK V K + E + VDK Sbjct: 863 EKATGDKGAEENSTVDKGTEENSTV-DKGAEENSTVDKGTEENSTVDKGAEENSTVDK 919 Score = 28.3 bits (60), Expect = 4.1 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 267 GRSEPSFGRRRRDVNATIS--FEGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVD 440 G E S + + N+T+ E N TV K + N TVDK V K + E + VD Sbjct: 870 GAEENSTVDKGTEENSTVDKGAEENSTV-DKGTEENSTVDKGAEENSTVDKGTEENSTVD 928 Query: 441 K 443 K Sbjct: 929 K 929 >SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) Length = 442 Score = 28.7 bits (61), Expect = 3.1 Identities = 27/99 (27%), Positives = 40/99 (40%) Frame = +3 Query: 225 PNKYINNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGA 404 PN Y NN YC P+ + R D + EG D VI T DK D+N+G Sbjct: 279 PNNYENNEYCTWEI--RVPTGKKVRLDFTELRTEEGKDLVI-----IYDTGDKDDDNDGD 331 Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521 +Y + D Y D+ + + +V R ++ Sbjct: 332 DDDYNYND---DDYGDDDNDDDDDEKDNEDVMTKRMTMM 367 >SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 261 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/44 (29%), Positives = 27/44 (61%) Frame = +3 Query: 333 NDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDKYLKDEVE 464 +D + K + + VDK ++ +V KV+ ++ AVDK +D+++ Sbjct: 89 DDMGVDKVSEDDTGVDKVGEDDKSVDKVAEDDIAVDKVAEDDMD 132 >SB_8425| Best HMM Match : EGF (HMM E-Value=0) Length = 1955 Score = 28.7 bits (61), Expect = 3.1 Identities = 27/99 (27%), Positives = 40/99 (40%) Frame = +3 Query: 225 PNKYINNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEGA 404 PN Y NN YC P+ + R D + EG D VI T DK D+N+G Sbjct: 1792 PNNYENNEYCTWEI--RVPTGKKVRLDFTELRTEEGKDLVI-----IYDTGDKDDDNDGD 1844 Query: 405 VYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521 +Y + D Y D+ + + +V R ++ Sbjct: 1845 DDDYNYND---DDYGDDDNDDDDDEKDNEDVMTKRMTMM 1880 >SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) Length = 539 Score = 28.3 bits (60), Expect = 4.1 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +3 Query: 330 GNDTVIPKSEDANKTVDKPDNNEGAVYK-VSYEEAAVDKYLKDEVETPSHVRKMIEVFDN 506 G + SED D PD+ EG VY+ +S + +D+ + +E+ H R ++D Sbjct: 195 GEEVYEDMSEDKPHYTDVPDSGEGEVYEDLSGQGGILDEPM-EEMPGGYHSRPSYAIYDT 253 Query: 507 RNEL 518 + L Sbjct: 254 PSNL 257 >SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4) Length = 241 Score = 27.9 bits (59), Expect = 5.4 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 327 EGNDTVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDK 443 +G+ + + K +D +VDK D+ G+V K +VDK Sbjct: 79 DGDSSSVDKGDDGGGSVDKGDDGGGSVDKGDDGGGSVDK 117 >SB_14699| Best HMM Match : VAR1 (HMM E-Value=2) Length = 528 Score = 27.9 bits (59), Expect = 5.4 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +3 Query: 153 RREVSFLSLR*VDELTVMLSRYRSPNKYINNAYCPSHTGRSE 278 R + L LR D+L V+LS +SP Y+ + PS G E Sbjct: 479 RPKPQVLILRPRDQLKVLLSYKKSPLSYVTSTGGPSLLGEEE 520 >SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1907 Score = 27.9 bits (59), Expect = 5.4 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +3 Query: 144 VIVRREVSFLSLR*VD-ELTVMLSRYRSPNKYINNAYCP 257 V+V++ + + LR + +L + +RYR P K N CP Sbjct: 1030 VVVQKRIVLIKLRISNHKLEIEAARYRKPYKRANERICP 1068 >SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05) Length = 1084 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +3 Query: 366 NKTVDKPDNNEGAVYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELL 521 N + K D+N+ V V E + +D+ L+D + + K + V D E L Sbjct: 177 NNALQKIDSNKDFVLVVFLESSIIDRALRDAIYNFHSLVKTVIVGDGSEERL 228 >SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13) Length = 901 Score = 27.1 bits (57), Expect = 9.4 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = +3 Query: 288 GRRRRDVNATISFEGND-----TVIPKSEDANKTVDKPDNNEGAVYKVSYEEAAVDKYLK 452 G RDV +T +++G+D V+ K +D D N A+ + +Y+ V Sbjct: 57 GEEARDVYSTFNWDGDDKNKIEPVLKKFGKLRVCLDPKDLNR-AILRENYQMPTV----- 110 Query: 453 DEVETPSHVRKMIEVFDNRN 512 +++ T H K+ V D RN Sbjct: 111 EDIATRLHGAKVFTVLDVRN 130 >SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07) Length = 1306 Score = 27.1 bits (57), Expect = 9.4 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 233 FIWAPVTT*HDREFVYSSKR*KRNLSPDNHMILGGIAHGH 114 FI P T H++E+ Y SK + + P N ++HGH Sbjct: 257 FIRLPSYTWHEKEYWYRSKDPDKMILPLNVRPSETVSHGH 296 >SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) Length = 2049 Score = 27.1 bits (57), Expect = 9.4 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 219 RSPNKYI--NNAYCPSHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDN 392 + P K+I N +CP + EP G RRR V A + ++ E++N ++ ++ Sbjct: 1655 KPPIKHIPEGNWFCPDCRPK-EPRRGERRRKVPAQEESDSSEAESESEEESNSDTEEYEH 1713 Query: 393 NE 398 ++ Sbjct: 1714 SD 1715 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,186,532 Number of Sequences: 59808 Number of extensions: 288257 Number of successful extensions: 847 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 720 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 832 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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