Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17423 Cluster: Putative uncharacterized protein; n=2; ...    34   2.3  
UniRef50_Q39SG6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_A7HBR8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  

>UniRef50_Q17423 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 1185

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = +3

Query: 102 RVDGLNQKFVPTRAELQPEIISDYLKQVSYLELDQLLRIRSSL 230
           +VDGLN   + T +E QP +++D LK+V    L++   +RSS+
Sbjct: 721 KVDGLNM--ISTLSETQPRMVADNLKEVIIAILNECKNLRSSV 761


>UniRef50_Q39SG6 Cluster: Putative uncharacterized protein; n=1;
           Geobacter metallireducens GS-15|Rep: Putative
           uncharacterized protein - Geobacter metallireducens
           (strain GS-15 / ATCC 53774 / DSM 7210)
          Length = 182

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 120 G*VRQPYDVMEFNCSADAGFMPWSQL-GLDEIQ 25
           G +  P  +++ +C   AGF+PWS++ GLD IQ
Sbjct: 81  GLILSPAGIVDNSCGWSAGFIPWSEIVGLDIIQ 113


>UniRef50_A7HBR8 Cluster: Putative uncharacterized protein; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Putative
           uncharacterized protein - Anaeromyxobacter sp. Fw109-5
          Length = 322

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 43  QLTPWHEACVSAAIKFHHIIGLTDLTKNLYLPARNYSLKLSVII*NK 183
           +LTP H   V A +KF +++G  D T + +LP   +     ++  N+
Sbjct: 260 ELTPVHNVTVGADVKFSNLVGKDDGTSSGFLPLERFPRSRGLLAENR 306


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,757,214
Number of Sequences: 1657284
Number of extensions: 7407912
Number of successful extensions: 13013
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13011
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)