Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E03f
         (509 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0324 - 20946774-20946935,20947301-20947780                       75   4e-14
02_04_0361 - 22359278-22359439,22362291-22362728                       71   5e-13
01_06_0783 + 31975261-31975398,31975583-31975726                       68   4e-12
01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660           64   6e-11
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749     57   9e-09

>01_05_0324 - 20946774-20946935,20947301-20947780
          Length = 213

 Score = 74.5 bits (175), Expect = 4e-14
 Identities = 30/61 (49%), Positives = 46/61 (75%)
 Frame = +1

Query: 25  ALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFK 204
           +L+KF+  + +A  +KKEFDK Y PTWHCIVG ++GS+VTH    F+YF + ++ ++LFK
Sbjct: 145 SLDKFS-SRQLAHDVKKEFDKVYGPTWHCIVGTSYGSFVTHARGCFLYFSMDKIIVMLFK 203

Query: 205 S 207
           +
Sbjct: 204 T 204


>02_04_0361 - 22359278-22359439,22362291-22362728
          Length = 199

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +1

Query: 49  KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKS 207
           K +A  +KKEFD  Y P WHCIVG  FGSYVTH    F+YF + +V +LLF++
Sbjct: 138 KRLALALKKEFDATYGPAWHCIVGTGFGSYVTHSVGGFLYFSVDKVYVLLFRT 190


>01_06_0783 + 31975261-31975398,31975583-31975726
          Length = 93

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = +1

Query: 22  QALEKFNIE--KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAIL 195
           +AL++F++   + IAA IKKEFD  + P W C+VG +FG Y TH    FIYF LG +  L
Sbjct: 27  KALDRFDVLDCRSIAAHIKKEFDMIHGPGWQCVVGASFGCYFTHSKGSFIYFKLGALRFL 86

Query: 196 LFK 204
           +FK
Sbjct: 87  VFK 89


>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
          Length = 111

 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +1

Query: 25  ALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNF 129
           A EK  +EKDIA +IKKEFDK + PTWHCIVGRNF
Sbjct: 69  AFEKHTMEKDIAEYIKKEFDKNHGPTWHCIVGRNF 103


>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
          Length = 135

 Score = 56.8 bits (131), Expect = 9e-09
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = +1

Query: 25  ALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGS 135
           A EK  +EKDI  +IK EFDK + PTWHCIVG NFG+
Sbjct: 81  AFEKHTMEKDIVEYIK-EFDKNHGPTWHCIVGHNFGT 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,857,434
Number of Sequences: 37544
Number of extensions: 237334
Number of successful extensions: 551
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)