Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E03f
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   3.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   4.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.0  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = -3

Query: 276 GYPSDNTASAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKITT 118
           G+  +  A+AAN  +EV+   +   +++     Q E  + A       A+ TT
Sbjct: 273 GHTVEELAAAANVSVEVIKEAIRVRQQELRAQKQYEKQQAAFAQTQFLAQQTT 325


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 152 VSCVTYEPKLRPTMQCQVGLYFL 84
           +SC++Y+P++   MQ   G  F+
Sbjct: 605 LSCISYDPEVDQAMQFAFGHSFI 627


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +2

Query: 155 ATSSTSTWDRWLYCSLRAVRPFSITSIFLLAADAVLSDG*PLQILMRGSGCGTFP 319
           A +S   + RW  CS+R      ++ +  +A D +L      Q +++ +  GT P
Sbjct: 318 AKTSLPGYSRWRTCSVREKDTAFVSELLGIATD-ILGKALRQQTVLQRTPSGTEP 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,413
Number of Sequences: 2352
Number of extensions: 9382
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)