Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E03f
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   140   1e-33
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   140   1e-33
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   140   1e-33
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   140   1e-33
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   138   3e-33
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   138   3e-33
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   138   3e-33
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   138   3e-33
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   138   3e-33
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   138   3e-33
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   138   3e-33
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    53   2e-07

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  140 bits (338), Expect = 1e-33
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  140 bits (338), Expect = 1e-33
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  140 bits (338), Expect = 1e-33
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  140 bits (338), Expect = 1e-33
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/63 (96%), Positives = 63/63 (100%)
 Frame = +1

Query: 22  QALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 201
           QALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF
Sbjct: 27  QALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLF 86

Query: 202 KSG 210
           KSG
Sbjct: 87  KSG 89


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = +1

Query: 25  ALEKFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIY-FYLGQVAILL 198
           A EK++   + AA  IK+  DKK+   WH +VG  FG  V++ET + +Y F+ G +AI+L
Sbjct: 41  ACEKYSSNYEHAAKIIKENMDKKFGIYWHVVVGEGFGFEVSYETENILYLFFAGNLAIVL 100

Query: 199 FK 204
           +K
Sbjct: 101 WK 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,379,945
Number of Sequences: 53049
Number of extensions: 404461
Number of successful extensions: 939
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)