Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305E02f
         (518 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g22580.1 68416.m02853 protease inhibitor/seed storage/lipid t...    31   0.47 
At5g36910.1 68418.m04424 thionin (THI2.2) identical to thionin [...    27   7.6  

>At3g22580.1 68416.m02853 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein contains Pfam
           protease inhibitor/seed storage/LTP family domain
           PF00234
          Length = 127

 Score = 31.1 bits (67), Expect = 0.47
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 466 TIFLAKMNLTLVADKVN*CNNSLKVPLRQCFS 371
           T+F+A M+ T V+ + N C N LK  L+ CFS
Sbjct: 13  TVFMAVMSSTRVSAQSN-CKNELKKSLKPCFS 43


>At5g36910.1 68418.m04424 thionin (THI2.2) identical to thionin
           [Arabidopsis thaliana] gi|1181533|gb|AAC41679
          Length = 134

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 313 YFLCNLSP*QQLYVLLKLRRRNT 381
           YF+C LS   Q Y LLK + +NT
Sbjct: 37  YFVCMLSVSSQFYCLLKSKCKNT 59


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,451,155
Number of Sequences: 28952
Number of extensions: 135943
Number of successful extensions: 237
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)