Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E01f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 66 5e-13
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 66 5e-13
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 66 5e-13
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 66 5e-13
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 41 2e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.30
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 6.2
AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprot... 23 8.2
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.5 bits (155), Expect = 5e-13
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 279 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 458
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 459 LEFAIYPAPQVSTAVVEPYNS 521
+++ P+P+VS VVEPYN+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNA 81
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.5 bits (155), Expect = 5e-13
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 279 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 458
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 459 LEFAIYPAPQVSTAVVEPYNS 521
+++ P+P+VS VVEPYN+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNA 81
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.5 bits (155), Expect = 5e-13
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 279 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 458
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 459 LEFAIYPAPQVSTAVVEPYNS 521
+++ P+P+VS VVEPYN+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNA 81
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.5 bits (155), Expect = 5e-13
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 279 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 458
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 459 LEFAIYPAPQVSTAVVEPYNS 521
+++ P+P+VS VVEPYN+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNA 81
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 41.1 bits (92), Expect = 2e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +1
Query: 16 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 195
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 196 XXAHTDSC 219
A T SC
Sbjct: 79 APARTASC 86
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.30
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 67 CPQTRPSGVETILSTLSSARPELAS 141
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.30
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 10 VMPAGSFTAWSTASSLMARCPQTRPSGV 93
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 89 GWRRFFQHFLQRDRSWQAR 145
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprotein
transferase protein.
Length = 103
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 203 HIQTVVSSRTTYYW*GRCGQQLCPWSLHHW 292
H + +RT +Y RC + C + ++W
Sbjct: 66 HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,960
Number of Sequences: 2352
Number of extensions: 12034
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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