Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 319 7e-88
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 319 7e-88
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 319 7e-88
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 319 7e-88
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 293 5e-80
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 293 5e-80
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 292 1e-79
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 290 5e-79
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 289 6e-79
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 287 3e-78
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 287 3e-78
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 287 3e-78
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 268 2e-72
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 267 3e-72
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 248 1e-66
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 246 6e-66
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 153 7e-38
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 151 4e-37
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 149 9e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 149 9e-37
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 79 3e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 79 3e-15
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 31 0.66
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.0
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.0
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.0
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 3.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 3.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 4.7
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 4.7
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 4.7
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 4.7
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 4.7
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 4.7
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 4.7
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 4.7
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 8.1
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 8.1
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 8.1
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 319 bits (784), Expect = 7e-88
Identities = 143/173 (82%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 319 bits (784), Expect = 7e-88
Identities = 143/173 (82%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV
Sbjct: 14 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 73
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQG
Sbjct: 74 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 133
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 134 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 186
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 319 bits (784), Expect = 7e-88
Identities = 143/173 (82%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 319 bits (784), Expect = 7e-88
Identities = 143/173 (82%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 135 FLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 293 bits (719), Expect = 5e-80
Identities = 132/173 (76%), Positives = 150/173 (86%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 293 bits (719), Expect = 5e-80
Identities = 132/173 (76%), Positives = 150/173 (86%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 292 bits (716), Expect = 1e-79
Identities = 131/173 (75%), Positives = 150/173 (86%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 290 bits (711), Expect = 5e-79
Identities = 130/173 (75%), Positives = 149/173 (86%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQV TAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNS 185
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 289 bits (710), Expect = 6e-79
Identities = 128/173 (73%), Positives = 147/173 (84%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGKHVPRA+ VDLEPT
Sbjct: 20 QMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTP 79
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+L + C GLQG
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQG 139
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSVDYGKKSKLEF IYPAPQVST++VEPYNS
Sbjct: 140 FLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNS 192
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 287 bits (704), Expect = 3e-78
Identities = 126/173 (72%), Positives = 148/173 (85%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKHVPRA+FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+L ++C LQG
Sbjct: 75 IDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYNS
Sbjct: 135 FLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNS 187
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 287 bits (704), Expect = 3e-78
Identities = 129/173 (74%), Positives = 148/173 (85%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 287 bits (704), Expect = 3e-78
Identities = 129/173 (74%), Positives = 148/173 (85%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTV 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 133 FFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 268 bits (657), Expect = 2e-72
Identities = 120/173 (69%), Positives = 139/173 (80%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYCLEHGI PDG T G S TFFS+TG G+HVPR++FVDLEPTV
Sbjct: 15 QIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTV 71
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+LA+ C GLQG
Sbjct: 72 VDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQG 131
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYNS
Sbjct: 132 FFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNS 184
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 267 bits (655), Expect = 3e-72
Identities = 120/173 (69%), Positives = 140/173 (80%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTV
Sbjct: 21 QIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTV 80
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
VDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQG
Sbjct: 81 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 140
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F+IFH LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNS
Sbjct: 141 FVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNS 193
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 248 bits (608), Expect = 1e-66
Identities = 112/173 (64%), Positives = 134/173 (77%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIGNACWELYC+EHG+ G + ++ S FFSE+ GKHVPRA++VDLEPTV
Sbjct: 19 QIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAIYVDLEPTV 77
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRIRK + C GLQG
Sbjct: 78 LDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQG 137
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+FH LLMERLSV++GKKSKLEF++YPAPQVST+VVEPYNS
Sbjct: 138 FLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNS 190
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 246 bits (603), Expect = 6e-66
Identities = 111/165 (67%), Positives = 132/165 (80%)
Frame = +3
Query: 27 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 206
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 207 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 386
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 387 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNS
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNS 165
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 153 bits (371), Expect = 7e-38
Identities = 74/173 (42%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ EHGIQPDG + + + N +++E GK+VPRAV VDLEP
Sbjct: 15 QIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 133 FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 152 bits (368), Expect = 2e-37
Identities = 74/173 (42%), Positives = 105/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VDLEP
Sbjct: 15 QIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 133 FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 151 bits (365), Expect = 4e-37
Identities = 73/173 (42%), Positives = 105/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VDLEP
Sbjct: 15 QIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ ++ + F++ P+P+VS VVEPYN+
Sbjct: 133 FQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNA 185
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 149 bits (362), Expect = 9e-37
Identities = 73/173 (42%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VDLEP
Sbjct: 15 QIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQG
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 133 FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 149 bits (362), Expect = 9e-37
Identities = 73/173 (42%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VDLEP
Sbjct: 15 QIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQG
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 133 FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 149 bits (360), Expect = 2e-36
Identities = 72/173 (41%), Positives = 101/173 (58%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ EHGI P G D + + N +++E GK+VPRA VDLEP
Sbjct: 15 QIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 73 MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + + F++ P+P+VS VVEPYN+
Sbjct: 133 FQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNA 185
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 128 bits (308), Expect = 3e-30
Identities = 66/173 (38%), Positives = 96/173 (55%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE EHG+Q DG D G + +++ E K+VPRA+ VDL+P
Sbjct: 15 QIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPES 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+G
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ +L +Y K+ +I P+ +VS VVEPYN+
Sbjct: 133 FQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNA 185
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 128 bits (308), Expect = 3e-30
Identities = 66/173 (38%), Positives = 96/173 (55%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE EHG+Q DG D G + +++ E K+VPRA+ VDL+P
Sbjct: 15 QIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPES 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+G
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ +L +Y K+ +I P+ +VS VVEPYN+
Sbjct: 133 FQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNA 185
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 78.6 bits (185), Expect = 3e-15
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+ A W+ EHGI GQ + + +D + F + +VPRAV VDLEP V
Sbjct: 18 QLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRV 74
Query: 183 VD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 353
++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I + A+
Sbjct: 75 INGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133
Query: 354 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYN 518
L G L H LL+ERL + KK ++++ ST VV PYN
Sbjct: 134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYN 189
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 78.6 bits (185), Expect = 3e-15
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+ A W+ EHGI GQ + + +D + F + +VPRAV VDLEP V
Sbjct: 18 QLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRV 74
Query: 183 VD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 353
++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I + A+
Sbjct: 75 INGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133
Query: 354 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYN 518
L G L H LL+ERL + KK ++++ ST VV PYN
Sbjct: 134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYN 189
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 13 MPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 144
MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 197 MPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 183 VDE 191
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 183 VDE 191
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 183 VDE 191
DE
Sbjct: 116 ADE 118
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 494 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 315
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 314 NQI 306
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 251 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 156
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 180 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 111 TFFSETGAGKHVPRAVFVDLEPTVVD 188
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 111 TFFSETGAGKHVPRAVFVDLEPTVVD 188
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 111 TFFSETGAGKHVPRAVFVDLEPTVVD 188
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,412,666
Number of Sequences: 27780
Number of extensions: 263339
Number of successful extensions: 703
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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