Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305E01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 320 3e-88
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 320 3e-88
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 319 6e-88
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 319 6e-88
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 307 4e-84
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 307 4e-84
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 293 4e-80
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 159 1e-39
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 157 4e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 156 1e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 156 1e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 155 2e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 154 3e-38
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 153 7e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 153 7e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 149 1e-36
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 109 1e-24
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 108 2e-24
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.62
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.1
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 1.9
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 4.4
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 4.4
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 4.4
At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P4... 27 5.8
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 5.8
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 5.8
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 5.8
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 7.7
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 7.7
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 7.7
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 7.7
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 7.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 320 bits (787), Expect = 3e-88
Identities = 144/173 (83%), Positives = 157/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 320 bits (787), Expect = 3e-88
Identities = 144/173 (83%), Positives = 157/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 319 bits (784), Expect = 6e-88
Identities = 144/173 (83%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 319 bits (784), Expect = 6e-88
Identities = 144/173 (83%), Positives = 156/173 (90%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 307 bits (753), Expect = 4e-84
Identities = 138/173 (79%), Positives = 152/173 (87%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 307 bits (753), Expect = 4e-84
Identities = 138/173 (79%), Positives = 152/173 (87%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 15 QVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 293 bits (720), Expect = 4e-80
Identities = 130/173 (75%), Positives = 150/173 (86%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF+DLEPTV
Sbjct: 15 QVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTV 74
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQG 134
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
FL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNS 187
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 159 bits (386), Expect = 1e-39
Identities = 73/176 (41%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLE 173
QIG+ WE+ C EHGI P G+ +G D + N +++E G++VPRA+ +DLE
Sbjct: 15 QIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAILMDLE 69
Query: 174 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 353
P +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 129
Query: 354 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 157 bits (381), Expect = 4e-39
Identities = 70/173 (40%), Positives = 106/173 (61%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ C EHG+ P G+ D + N +++E G++VPRAV +DLEP
Sbjct: 15 QIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMDLEPGT 73
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 MDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 71/173 (41%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP
Sbjct: 15 QIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 71/173 (41%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP
Sbjct: 15 QIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (375), Expect = 2e-38
Identities = 70/173 (40%), Positives = 106/173 (61%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ C EHGI G+ D T + N +++E G++VPRAV +DLEP
Sbjct: 15 QIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMDLEPGT 73
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 MDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 154 bits (374), Expect = 3e-38
Identities = 71/173 (41%), Positives = 105/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ C EHGI GQ D + + N +F+E GK+VPRAV +DLEP
Sbjct: 15 QIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 153 bits (371), Expect = 7e-38
Identities = 70/173 (40%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ C EHGI G+ + + + N +++E G+ VPRAV +DLEP
Sbjct: 15 QIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 153 bits (371), Expect = 7e-38
Identities = 70/173 (40%), Positives = 106/173 (61%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG+ WE+ LEHGI G+ D + + N +++E G++VPRAV +DLEP
Sbjct: 15 QIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (360), Expect = 1e-36
Identities = 69/173 (39%), Positives = 104/173 (60%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG WE+ C EHGI GQ D + + + +F+E GK+VPRAV +DLEP
Sbjct: 15 QIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMDLEPGT 72
Query: 183 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 362
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ LQG
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQG 132
Query: 363 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 521
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (261), Expect = 1e-24
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP V
Sbjct: 16 QIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRV 73
Query: 183 VDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGL 356
++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD L
Sbjct: 74 INGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSL 132
Query: 357 QGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNS 521
+GF++ H L+E L+ Y KK ++++P + S VV+PYNS
Sbjct: 133 EGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 108 bits (260), Expect = 2e-24
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 182
QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP V
Sbjct: 16 QIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRV 73
Query: 183 VDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGL 356
++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD L
Sbjct: 74 INGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSL 132
Query: 357 QGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNS 521
+GF++ H L+E L+ Y KK ++++P + S VV+PYNS
Sbjct: 133 EGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 0.62
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -1
Query: 398 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 219
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 218 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 84
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 39 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 188
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 130 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 5
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 4.4
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 27 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 194
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 195 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 4.4
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 27 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 194
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 195 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 4.4
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 27 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 194
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 195 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 323
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P450
77A3p, Glycine max., PIR:T05948
Length = 512
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 126 TGAGKHVPRAVFVDLE-PTVVDEVRTGTYRQLFHPEQLITGKEDA 257
T AG +P V V++ P + ++ R + F P++ + GKEDA
Sbjct: 392 TLAGYDIPAGVNVEVYLPGISEDPRIWNNPKKFDPDRFMLGKEDA 436
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 5.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 330 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 241
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 5.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 330 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 241
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 96 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 230
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 167 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 12
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 167 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 12
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 167 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 12
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 167 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 12
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 170 KIDEDSTGYVLASSGLAEESVERIVSTPD 84
+++ DS+GYVL G + SVE + + D
Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,986,831
Number of Sequences: 28952
Number of extensions: 256199
Number of successful extensions: 799
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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