SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.31 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    24   0.94 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.7  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 140 FHRVLVAIGSI--EAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQM 313
           FHR +   G      AR +     Q    LG      KEI   ++A+  D+L  +++K  
Sbjct: 206 FHRAIAQSGCAFNGFARGIPDTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEKVA 265

Query: 314 NVFTPESEYLESTDSGF 364
           N++  +  Y    D  F
Sbjct: 266 NIWGLKKVYAPVVDGEF 282


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 140 FHRVLVAIGSI--EAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQM 313
           FHR +   G      AR +     Q    LG      KEI   ++A+  D+L  ++++  
Sbjct: 208 FHRAIAQSGCALNGFARGIPDTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEEVA 267

Query: 314 NVFTPESEYLESTDSGF 364
           N++  +  Y    D  F
Sbjct: 268 NIWGLKKVYAPVVDGEF 284


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 253 DFFYFAFHIPQLFLLLI 203
           D+FYF+F+I    LL +
Sbjct: 54  DYFYFSFYITSYTLLSV 70


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 253 DFFYFAFHIPQLFLLLI 203
           D+FYF+F+I    LL +
Sbjct: 54  DYFYFSFYITSYTLLSV 70


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 25  FCPILCRLKVIYTLFFQDSELLRDVA 102
           FC  +  L      FF  SELL D+A
Sbjct: 43  FCTFVAALVYCSVTFFALSELLTDLA 68


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 137 KFHRVLVAIGSIEAARPVTININQ 208
           K+ +VLV         P+TINI +
Sbjct: 21  KYLKVLVTFAHFICLFPITINIRK 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,789
Number of Sequences: 336
Number of extensions: 2082
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -