Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305D10f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.58
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 31 0.76
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 30 1.3
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 29 3.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08) 28 4.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_46909| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00039) 28 5.4
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_6177| Best HMM Match : PDE6_gamma (HMM E-Value=1.6) 27 7.1
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5) 27 9.4
SB_10926| Best HMM Match : Pkinase (HMM E-Value=3e-24) 27 9.4
SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4) 27 9.4
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 218 QLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVNKASEER 397
Q+ + E V+ +M++ +RD +++ K E + VN+ EE
Sbjct: 1599 QVQEQESMVQNNEMQLLNAERDLQEMLMAKDATDSAENLESVSKERDNLLRDVNRLREEV 1658
Query: 398 SCN---LTQITKLREEL 439
S N +T +TK R+EL
Sbjct: 1659 STNKTTITNVTKRRDEL 1675
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 30.7 bits (66), Expect = 0.76
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = +2
Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 379
IN+K+K + + E +Q EI ++ + + + + Q NV + +E + E +
Sbjct: 1224 INEKEKVIQSLYEERSRLQGEIGNLRHEIVSIKNEGQRNVTIQVEKRVEIYKN---EIMG 1280
Query: 380 KASEERSCNLTQITKLREELIRAK 451
K E + TQ+ KL+EE+ +K
Sbjct: 1281 KEKEMQQLR-TQVFKLQEEVEASK 1303
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +2
Query: 212 QKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVNKASE 391
QKQ D + +VKE++ +IA +++ D K + + E++ S FG++ N A +
Sbjct: 699 QKQSSDAQLQVKEMEHKIAKFQKESKDAANK--VESMLAKYEWISSERQYFGQA-NTAYD 755
Query: 392 ERSCNLTQITKLREELIRAK 451
S ++ + K +L K
Sbjct: 756 FASNDMKDVGKRLNKLNETK 775
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 212 QKQLGDMEGEVKEIQMEIAAIK 277
QK DM+G VK++QMEIA +K
Sbjct: 305 QKDCEDMKGLVKDLQMEIAYLK 326
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 188 VTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQ 310
+T ++N+ + D+E E +E++ + RDRLD+ KQ
Sbjct: 35 LTASVNKLSLAVNDLEMENEELRERLGMDPRDRLDIEEIKQ 75
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 379
+N+KQKQ E +K ++ I+ ++ D ++ T + V+ + + + V
Sbjct: 1626 LNEKQKQKEKAEDNLKALKKRISDLEVDNKNLETARDNAVYERDIANQKFVEQRTDNEVL 1685
Query: 380 KASEERSCNLTQITKLREELIR 445
K EE+ L Q+ L+ E+ R
Sbjct: 1686 K--EEKEKLLMQLKDLQNEVAR 1705
>SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = +2
Query: 242 VKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVNKASEERSCNLTQIT 421
+KE++ +++ +KR ++ K + + EY+ S G+ S + QI
Sbjct: 43 IKELEDQVSDLKRRLGELRKAKSQTIVKKDKEYVTSDAPQLGQKTGVLSHDLDAYKKQIR 102
Query: 422 KLREEL 439
+L+ +L
Sbjct: 103 ELQGKL 108
>SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08)
Length = 1213
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 211 AKTIGGYGRRSKRNPDGNSRYKT*PIRCDDEETDECFYAG 330
AK + ++KR P + KT P+ C ++ET E Y G
Sbjct: 649 AKILNTRIAKTKREPKQTRKKKT-PVSCTEDETPEIEYGG 687
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKR------DRLDVMTKKQMNVFTPESEYLESTDSG 361
+++K +++ D++GEVK+ Q + ++KR + D + + + ++ + E LE T
Sbjct: 1666 LDEKSREVTDLKGEVKKAQDDADSVKRLVDAIIEENDTLKQSEHDLLAIQ-EDLEHTIDE 1724
Query: 362 FGESVNKASEERSCNLTQITKLREELIR 445
K +E S ++ + +EE+ +
Sbjct: 1725 LVAEKQKLIQENSALVSSLHAEKEEMYK 1752
>SB_46909| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00039)
Length = 685
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -2
Query: 265 YFHLDFFYFAFHIPQLFLLLIDVNGHGSSCFDATDSD 155
Y++ ++Y+ ++ P+ ++ VNGH +D+T+ D
Sbjct: 526 YYYYYYYYYYYYYPRQ-VVRYPVNGHFHGHYDSTEDD 561
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 176 AARPVTININQKQKQLGDMEGEVKEIQ-MEIAAIKRDRLDVMTKKQMNVFTPESEYLES 349
A R + I N KQK + + I ++ +KR + D + K+Q N +S+ LE+
Sbjct: 170 AIRRLVIRANMKQKNSTENNSKKHLISDNNVSELKRQKEDNLDKRQKNSHVGDSKVLEN 228
>SB_6177| Best HMM Match : PDE6_gamma (HMM E-Value=1.6)
Length = 642
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 320 FTPESEYLESTDSGFGESVNKA-SEERSCNLTQITKLREELIR 445
F +S L S S + E V+K SEE+SC + ++ +++ +IR
Sbjct: 297 FRAQSWVLFSLSSPYMEFVSKVCSEEKSCQVRRVRSVQQLMIR 339
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 167 SIEAARPVTININQKQ---KQLGDMEGEVKEIQMEIAAIKRDRLDVMTKK 307
+IEAAR I QKQ +Q + E VKE +++I +R+R++ + K+
Sbjct: 1169 AIEAARKKQEEIRQKQAAWRQQEEEEQRVKE-RLQILREERERIEALNKE 1217
>SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5)
Length = 541
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 215 KQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 379
K + D+E ++KE ++ ++K + L ++ K +++ + S ES SG G S+N
Sbjct: 186 KDILDLESDIKEKDVDEGSLKENSLSLVDKVLLDLESISSR--ESLTSGLG-SIN 237
>SB_10926| Best HMM Match : Pkinase (HMM E-Value=3e-24)
Length = 1102
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +2
Query: 230 MEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVNKASEERSCNL 409
ME + K +E + + +++ +V + L + E + EER N
Sbjct: 388 MEADAKGKALEQTESELRTIKGQIRERDHVIAEKERALARLERLKAEVDRQLDEERRTNT 447
Query: 410 TQITKLREELIRAK 451
T + +LREE+ R +
Sbjct: 448 TSLARLREEIARLR 461
>SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4)
Length = 422
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 215 KQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 379
K + D+E ++KE ++ ++K + L ++ K +++ + S ES SG G S+N
Sbjct: 161 KDILDLESDIKEKDVDEGSLKENSLSLVDKVLLDLESISSR--ESLTSGLG-SIN 212
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,975,549
Number of Sequences: 59808
Number of extensions: 232772
Number of successful extensions: 661
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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