Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95654-1|CAA64956.1|  976|Homo sapiens polypeptide of 976 aa pro...    33   0.61 
D67035-1|BAA22586.1|  973|Homo sapiens SCP-1 protein.                  33   0.61 
BC126266-1|AAI26267.1|  976|Homo sapiens synaptonemal complex pr...    33   0.61 
AL645502-1|CAH70064.1|  976|Homo sapiens synaptonemal complex pr...    33   0.61 
AL358372-3|CAH72848.1|  792|Homo sapiens synaptonemal complex pr...    33   0.61 
AL358372-2|CAH72847.1|  976|Homo sapiens synaptonemal complex pr...    33   0.61 
AF273043-1|AAG34903.1|  795|Homo sapiens CTCL tumor antigen se2-...    33   0.61 
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ...    32   1.1  
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ...    32   1.1  
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.    32   1.1  
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.     32   1.1  
J05032-1|AAA35567.1|  500|Homo sapiens protein ( Human aspartyl-...    31   3.2  
BT006710-1|AAP35356.1|  501|Homo sapiens aspartyl-tRNA synthetas...    31   3.2  
BC107749-1|AAI07750.1|  501|Homo sapiens aspartyl-tRNA synthetas...    31   3.2  
BC000629-1|AAH00629.1|  501|Homo sapiens aspartyl-tRNA synthetas...    31   3.2  
AY762100-1|AAX07827.1|  501|Homo sapiens cell proliferation-indu...    31   3.2  
AK222476-1|BAD96196.1|  501|Homo sapiens aspartyl-tRNA synthetas...    31   3.2  
AF019888-1|AAB71548.1|  168|Homo sapiens Arp2/3 complex 20 kDa s...    30   5.7  
AF006087-1|AAB64192.1|  168|Homo sapiens p20-Arc protein.              30   5.7  
BC036667-1|AAH36667.1|  874|Homo sapiens coiled-coil domain cont...    29   7.5  
AK093035-1|BAC04026.1|  809|Homo sapiens protein ( Homo sapiens ...    29   7.5  
Z20656-1|CAA79675.1| 1939|Homo sapiens cardiac alpha-myosin heav...    29   9.9  
AC093391-1|AAY24055.1|  188|Homo sapiens unknown protein.              29   9.9  

>X95654-1|CAA64956.1|  976|Homo sapiens polypeptide of 976 aa
           protein.
          Length = 976

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>D67035-1|BAA22586.1|  973|Homo sapiens SCP-1 protein.
          Length = 973

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 597 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 654

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 655 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 686


>BC126266-1|AAI26267.1|  976|Homo sapiens synaptonemal complex
           protein 1 protein.
          Length = 976

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>AL645502-1|CAH70064.1|  976|Homo sapiens synaptonemal complex
           protein 1 protein.
          Length = 976

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>AL358372-3|CAH72848.1|  792|Homo sapiens synaptonemal complex
           protein 1 protein.
          Length = 792

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>AL358372-2|CAH72847.1|  976|Homo sapiens synaptonemal complex
           protein 1 protein.
          Length = 976

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>AF273043-1|AAG34903.1|  795|Homo sapiens CTCL tumor antigen se2-1
           protein.
          Length = 795

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +2

Query: 197 NINQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE----STDSGF 364
           N N  +KQ+ +    ++E+Q E  A+K+        KQ+NV+  +   LE    S    F
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKK--GTAESKQLNVYEIKVNKLELELESAKQKF 657

Query: 365 GESVNKASEERSCNLTQITKLREELIRAKTLA 460
           GE  +   +E          L EE+ +AK +A
Sbjct: 658 GEITDTYQKEIEDKKISEENLLEEVEKAKVIA 689


>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
           coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLES-TDSGFGESV 376
           +N+K K+L +ME E ++   EI  +KR+  +V  K   +V   E E ++S  +   GE  
Sbjct: 643 VNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELG 702

Query: 377 NKASEERSCNLTQITKLREELIRAKTL 457
            K +E    N T   ++ +  +  K L
Sbjct: 703 KKITELTLKNQTLQKEIEKVYLDNKLL 729


>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
           coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLES-TDSGFGESV 376
           +N+K K+L +ME E ++   EI  +KR+  +V  K   +V   E E ++S  +   GE  
Sbjct: 643 VNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELG 702

Query: 377 NKASEERSCNLTQITKLREELIRAKTL 457
            K +E    N T   ++ +  +  K L
Sbjct: 703 KKITELTLKNQTLQKEIEKVYLDNKLL 729


>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
          Length = 1416

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLES-TDSGFGESV 376
           +N+K K+L +ME E ++   EI  +KR+  +V  K   +V   E E ++S  +   GE  
Sbjct: 643 VNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELG 702

Query: 377 NKASEERSCNLTQITKLREELIRAKTL 457
            K +E    N T   ++ +  +  K L
Sbjct: 703 KKITELTLKNQTLQKEIEKVYLDNKLL 729


>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
          Length = 1416

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLES-TDSGFGESV 376
           +N+K K+L +ME E ++   EI  +KR+  +V  K   +V   E E ++S  +   GE  
Sbjct: 643 VNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELG 702

Query: 377 NKASEERSCNLTQITKLREELIRAKTL 457
            K +E    N T   ++ +  +  K L
Sbjct: 703 KKITELTLKNQTLQKEIEKVYLDNKLL 729


>J05032-1|AAA35567.1|  500|Homo sapiens protein ( Human
           aspartyl-tRNA synthetase alpha-2 subunit mRNA, complete
           cds. ).
          Length = 500

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 21/103 (20%), Positives = 45/103 (43%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 87  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 146

Query: 326 PESEYLESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E       D        +  EE    + Q T+L   +I  +T
Sbjct: 147 AEPRLPLQLDDAV-RPEQEGEEEGRATVNQDTRLDNRVIDLRT 188


>BT006710-1|AAP35356.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E    L+  D+   E+  +  EE    + Q T+L   +I  +T
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVIDLRT 189


>BC107749-1|AAI07750.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E    L+  D+   E+  +  EE    + Q T+L   +I  +T
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVIDLRT 189


>BC000629-1|AAH00629.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E    L+  D+   E+  +  EE    + Q T+L   +I  +T
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVIDLRT 189


>AY762100-1|AAX07827.1|  501|Homo sapiens cell
           proliferation-inducing protein 40 protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E    L+  D+   E+  +  EE    + Q T+L   +I  +T
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVIDLRT 189


>AK222476-1|BAD96196.1|  501|Homo sapiens aspartyl-tRNA synthetase
           variant protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            E    L+  D+   E+  +  EE    + Q T+L   +I  +T
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVIDLRT 189


>AF019888-1|AAB71548.1|  168|Homo sapiens Arp2/3 complex 20 kDa
           subunit protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +2

Query: 182 RPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLD-VMTKKQMNVFTPESE 337
           +PVTI+ N+K+K L  +EG +  +++ IA  + D ++ ++  K M      +E
Sbjct: 49  QPVTISRNEKEKVL--IEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAE 99


>AF006087-1|AAB64192.1|  168|Homo sapiens p20-Arc protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +2

Query: 182 RPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLD-VMTKKQMNVFTPESE 337
           +PVTI+ N+K+K L  +EG +  +++ IA  + D ++ ++  K M      +E
Sbjct: 49  QPVTISRNEKEKVL--IEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAE 99


>BC036667-1|AAH36667.1|  874|Homo sapiens coiled-coil domain
           containing 135 protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = +2

Query: 182 RPVTIN---INQKQKQLGDMEGEVKEIQM----EIAAIKRDRLDVMTKK-QMNVFTPESE 337
           RPV +    I  KQ+ L D+E ++ EIQ+    E+ A  +D +D+          TP+ E
Sbjct: 33  RPVEVRKEEITLKQETLRDLEKKLSEIQITVSAELPAFTKDTIDISKLPISYKTNTPKEE 92

Query: 338 YLESTDSGFGESVNKASEER 397
           +L      F    +    +R
Sbjct: 93  HLLQVADNFSRQYSHLCPDR 112


>AK093035-1|BAC04026.1|  809|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35716 fis, clone TESTI2000431. ).
          Length = 809

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = +2

Query: 182 RPVTIN---INQKQKQLGDMEGEVKEIQM----EIAAIKRDRLDVMTKK-QMNVFTPESE 337
           RPV +    I  KQ+ L D+E ++ EIQ+    E+ A  +D +D+          TP+ E
Sbjct: 33  RPVEVRKEEITLKQETLRDLEKKLSEIQITVSAELPAFTKDTIDISKLPISYKTNTPKEE 92

Query: 338 YLESTDSGFGESVNKASEER 397
           +L      F    +    +R
Sbjct: 93  HLLQVADNFSRQYSHLCPDR 112


>Z20656-1|CAA79675.1| 1939|Homo sapiens cardiac alpha-myosin heavy
            chain protein.
          Length = 1939

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +2

Query: 164  GSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYL 343
            GS+E  + V +++ + +++L   EG++K  Q  I  ++ D+L +  K +   F    +  
Sbjct: 1038 GSLEQEKKVRMDLERAKRKL---EGDLKLTQESIMDLENDKLQLEEKLKKKEFDINQQNS 1094

Query: 344  ESTD-SGFGESVNKASEERSCNLTQITKLREELIRAKT 454
            +  D       + K  +E   N  +I +L EEL   +T
Sbjct: 1095 KIEDEQALALQLQKKLKE---NQARIEELEEELEAERT 1129


>AC093391-1|AAY24055.1|  188|Homo sapiens unknown protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
 Frame = +2

Query: 146 RVLVAIGSIEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFT 325
           + LVA+G   + + V    N  ++ + D+EG V+++  +I +  +  +++  +K   +  
Sbjct: 88  QALVAVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISL 147

Query: 326 PESEY-LESTDSGFGESVNKASEERSCNLTQITKLREELI 442
            E    L+  D+   E+  +  EE    + Q T+L   +I
Sbjct: 148 AEPRLPLQLDDAVRPEA--EGEEEGRATVNQDTRLDNRVI 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,869,736
Number of Sequences: 237096
Number of extensions: 1147100
Number of successful extensions: 2665
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2664
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)