Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF273707-1|AAL35409.1|  879|Drosophila melanogaster PFTAIRE-inte...    30   2.2  
AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB...    30   2.2  
AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA...    30   2.2  

>AF273707-1|AAL35409.1|  879|Drosophila melanogaster
           PFTAIRE-interacting factor 1A protein.
          Length = 879

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
 Frame = +2

Query: 170 IEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVF-----TPES 334
           ++AA    I+  +KQ Q+G++   +KE++   ++++ +  ++  + ++  F       +S
Sbjct: 153 LDAAEKAAISRAKKQAQIGELMQRIKELEEMQSSLEDEASELREQNELLEFRILELEDDS 212

Query: 335 EYLESTDSGFGESVNKASEERSCNL 409
           + +EST  G  +S+    E+ +  L
Sbjct: 213 DKMESTCEGHCQSLQDLLEQSAQRL 237


>AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB,
           isoform B protein.
          Length = 1308

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
 Frame = +2

Query: 170 IEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVF-----TPES 334
           ++AA    I+  +KQ Q+G++   +KE++   ++++ +  ++  + ++  F       +S
Sbjct: 153 LDAAEKAAISRAKKQAQIGELMQRIKELEEMQSSLEDEASELREQNELLEFRILELEDDS 212

Query: 335 EYLESTDSGFGESVNKASEERSCNL 409
           + +EST  G  +S+    E+ +  L
Sbjct: 213 DKMESTCEGHCQSLQDLLEQSAQRL 237


>AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA,
           isoform A protein.
          Length = 879

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
 Frame = +2

Query: 170 IEAARPVTININQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVF-----TPES 334
           ++AA    I+  +KQ Q+G++   +KE++   ++++ +  ++  + ++  F       +S
Sbjct: 153 LDAAEKAAISRAKKQAQIGELMQRIKELEEMQSSLEDEASELREQNELLEFRILELEDDS 212

Query: 335 EYLESTDSGFGESVNKASEERSCNL 409
           + +EST  G  +S+    E+ +  L
Sbjct: 213 DKMESTCEGHCQSLQDLLEQSAQRL 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,791,325
Number of Sequences: 53049
Number of extensions: 347133
Number of successful extensions: 925
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)