Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305D10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like ki... 29 1.5
AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical ... 29 1.5
AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical ... 29 1.5
Z46787-2|CAA86740.1| 262|Caenorhabditis elegans Hypothetical pr... 29 2.0
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 2.0
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 2.0
U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated p... 28 3.5
AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein. 28 3.5
Z74040-3|CAB54276.3| 246|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 27 6.2
>U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical
protein C15B12.2 protein.
Length = 269
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -2
Query: 352 CTFKIFRFRRKNIHLFLRHHI*SVTFYSGYFHLDFFYFAFHIPQLFLLLIDVNGHGSS 179
C F R K F+R+ SVTF+ F+L AF I LL V+G GS+
Sbjct: 88 CRHNSFYHRHKLCRSFIRYF--SVTFHYSIFYLSLLSSAFLIGLNITLLSSVHGLGSN 143
>AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like
kinase MST protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 FKCKFHRVLVAIGSIEAARPVTIN--INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMT 301
++ +F R +V G E R +T++ I +K+ +ME E++E+Q ++ LDV+
Sbjct: 433 YENRFQRAVVD-GDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTKRQPILDVIE 491
Query: 302 KKQ 310
K+
Sbjct: 492 IKK 494
>AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical
protein F14H12.4a protein.
Length = 495
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 FKCKFHRVLVAIGSIEAARPVTIN--INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMT 301
++ +F R +V G E R +T++ I +K+ +ME E++E+Q ++ LDV+
Sbjct: 431 YENRFQRAVVD-GDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTKRQPILDVIE 489
Query: 302 KKQ 310
K+
Sbjct: 490 IKK 492
>AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical
protein F14H12.4b protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 FKCKFHRVLVAIGSIEAARPVTIN--INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMT 301
++ +F R +V G E R +T++ I +K+ +ME E++E+Q ++ LDV+
Sbjct: 433 YENRFQRAVVD-GDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTKRQPILDVIE 491
Query: 302 KKQ 310
K+
Sbjct: 492 IKK 494
>Z46787-2|CAA86740.1| 262|Caenorhabditis elegans Hypothetical
protein C16C10.2 protein.
Length = 262
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +2
Query: 161 IGSIEAARPVTININQKQKQLGDMEGEVKEIQMEI-AAIKRDRLDVMTKKQMNVFTPESE 337
+GS++ V +N+++K++ +M+GE+ + + V T + F P
Sbjct: 100 LGSLKDLEYVKFKLNEEKKKIDEMKGELHFADSSLNGKGNTHTVFVDTDSEAKSFDPR-V 158
Query: 338 YLESTDSGFGESVNKASEERSCNLTQITKLREELIR 445
Y ++T S N+ E N T I +E +R
Sbjct: 159 YFDTTTSMLSRQFNRLKNEDFQNKTIIGAGTKEQVR 194
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = +2
Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQ 310
+++ +L D++GE+ +I +I+ ++R + ++ K+Q
Sbjct: 6 LSKLSTELADLDGEIGQIDQQISQLRRKKSELTQKRQ 42
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = +2
Query: 200 INQKQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQ 310
+++ +L D++GE+ +I +I+ ++R + ++ K+Q
Sbjct: 29 LSKLSTELADLDGEIGQIDQQISQLRRKKSELTQKRQ 65
>U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated
protein 98 protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 441 INSSRSFVICVKLQDLSSDALFTDSPKPLSVLSRYSDSGVKTFIC 307
I S+ V+ V QDL A T+ +P L Y+D K +IC
Sbjct: 204 IKVSKKRVLPVSEQDLPQPAFVTEGYEPKHPLRVYNDVRSKPYIC 248
>AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 441 INSSRSFVICVKLQDLSSDALFTDSPKPLSVLSRYSDSGVKTFIC 307
I S+ V+ V QDL A T+ +P L Y+D K +IC
Sbjct: 204 IKVSKKRVLPVSEQDLPQPAFVTEGYEPKHPLRVYNDVRSKPYIC 248
>Z74040-3|CAB54276.3| 246|Caenorhabditis elegans Hypothetical
protein K10D6.2c protein.
Length = 246
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 312 ICFFVITSNRSRFIAAISIWISFTSPSISPNCFCF*LMLMVTGLAA 175
I FF+ITS F+A ISI +P + F F + L + L +
Sbjct: 115 ILFFIITSE---FLAFISICSGVCAPCVPSTAFAFSISLFIAMLCS 157
>Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical
protein K10D6.2b protein.
Length = 287
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 312 ICFFVITSNRSRFIAAISIWISFTSPSISPNCFCF*LMLMVTGLAA 175
I FF+ITS F+A ISI +P + F F + L + L +
Sbjct: 115 ILFFIITSE---FLAFISICSGVCAPCVPSTAFAFSISLFIAMLCS 157
>Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical
protein K10D6.2a protein.
Length = 340
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 312 ICFFVITSNRSRFIAAISIWISFTSPSISPNCFCF*LMLMVTGLAA 175
I FF+ITS F+A ISI +P + F F + L + L +
Sbjct: 115 ILFFIITSE---FLAFISICSGVCAPCVPSTAFAFSISLFIAMLCS 157
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 212 QKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYL-ESTDSGFGESVNKAS 388
QK+L D+E E +++ EI +I R +D + +M+ F +S L + D+ + A
Sbjct: 418 QKELADVEREDEKLNNEIQSISR-TID-ENRYEMDTFAAKSTSLKQEYDAAYVAQQTAAR 475
Query: 389 EERS 400
EE++
Sbjct: 476 EEKA 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,921,483
Number of Sequences: 27780
Number of extensions: 189296
Number of successful extensions: 660
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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