Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D09f
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.93 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 175 LIVFLFACNRCTNTVHTT*LF 113
           ++  L+ CN+C NTV  + +F
Sbjct: 280 IVNVLYICNQCYNTVEESRIF 300


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 131 AYNVTFFYW*LIXLTSTTYIC 69
           AY+V F  W ++   S  ++C
Sbjct: 246 AYSVIFILWHIVGTFSGIFLC 266


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 21  LSHMYHLQSKTYICIYTYI 77
           L+ M H  + T+ C+Y +I
Sbjct: 150 LNFMLHCNNTTWRCLYRWI 168



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 122 VTFFYW*LIXLTSTTYICVYTYVGL 48
           ++FF   ++   +TT+ C+Y ++ L
Sbjct: 146 ISFFLNFMLHCNNTTWRCLYRWIVL 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,215
Number of Sequences: 336
Number of extensions: 2026
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)