Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D09f
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019324-1|AAH19324.1|  525|Homo sapiens alanyl-tRNA synthetase ...    49   9e-06
BC004172-1|AAH04172.1|  525|Homo sapiens alanyl-tRNA synthetase ...    49   9e-06
CR456599-1|CAG30485.1|  423|Homo sapiens TTLL1 protein.                29   7.4  
BC014968-1|AAH14968.1|  423|Homo sapiens tubulin tyrosine ligase...    29   7.4  
AL589867-1|CAC34478.1|  394|Homo sapiens hypothetical protein pr...    29   7.4  
AL096886-1|CAB51469.1|  423|Homo sapiens hypothetical protein pr...    29   7.4  
AL096883-1|CAB51423.1|  385|Homo sapiens hypothetical protein pr...    29   7.4  
AL022476-2|CAB39176.1|  423|Homo sapiens tubulin tyrosine ligase...    29   7.4  
AF104927-1|AAG29879.1|  423|Homo sapiens tubulin-tyrosine ligase...    29   7.4  
AF488550-1|AAO49470.1|  774|Homo sapiens hyperpolarization activ...    29   9.8  

>BC019324-1|AAH19324.1|  525|Homo sapiens alanyl-tRNA synthetase
           domain containing 1 protein.
          Length = 525

 Score = 49.2 bits (112), Expect = 9e-06
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = -2

Query: 454 DRAKEGQIIIQGPEEHCKALGDMITEMLKAKGAFKNGRFQGKASDLGAVNKCKKLVEDYF 275
           D    G  ++ GP    + LG  + E+L+ KGA K GRFQGKA+ +    + + L++DY 
Sbjct: 459 DEKGGGLFLLAGPPASVETLGPRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYI 518

Query: 274 N 272
           +
Sbjct: 519 S 519


>BC004172-1|AAH04172.1|  525|Homo sapiens alanyl-tRNA synthetase
           domain containing 1 protein.
          Length = 525

 Score = 49.2 bits (112), Expect = 9e-06
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = -2

Query: 454 DRAKEGQIIIQGPEEHCKALGDMITEMLKAKGAFKNGRFQGKASDLGAVNKCKKLVEDYF 275
           D    G  ++ GP    + LG  + E+L+ KGA K GRFQGKA+ +    + + L++DY 
Sbjct: 459 DEKGGGLFLLAGPPASVETLGPRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYI 518

Query: 274 N 272
           +
Sbjct: 519 S 519


>CR456599-1|CAG30485.1|  423|Homo sapiens TTLL1 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>BC014968-1|AAH14968.1|  423|Homo sapiens tubulin tyrosine
           ligase-like family, member 1 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>AL589867-1|CAC34478.1|  394|Homo sapiens hypothetical protein
           protein.
          Length = 394

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>AL096886-1|CAB51469.1|  423|Homo sapiens hypothetical protein
           protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>AL096883-1|CAB51423.1|  385|Homo sapiens hypothetical protein
           protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 180 FCRFCTVKYTPSTSELDNMFVHL 202


>AL022476-2|CAB39176.1|  423|Homo sapiens tubulin tyrosine
           ligase-like family, member 1 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>AF104927-1|AAG29879.1|  423|Homo sapiens tubulin-tyrosine ligase
           protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 5   FLRPCTVSYVPSTKQDLHMYIHI 73
           F R CTV Y PST +  +M++H+
Sbjct: 218 FCRFCTVKYTPSTSELDNMFVHL 240


>AF488550-1|AAO49470.1|  774|Homo sapiens hyperpolarization
           activated cyclic nucleotide-gated potassium channel
           protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 360 APSRTADSKGKPVIWEP 310
           APS  A   GKPV+WEP
Sbjct: 589 APSTGAQRSGKPVLWEP 605


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,721,787
Number of Sequences: 237096
Number of extensions: 1132209
Number of successful extensions: 2321
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2321
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)