BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305D07f (521 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 5.0 EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 5.0 AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 6.6 AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 6.6 DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.7 DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.7 >EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase 2B protein. Length = 528 Score = 21.4 bits (43), Expect = 5.0 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -3 Query: 387 CEIRGSLYPHRKLYTSMVVMDLQLR 313 C+IRG+ + K V DL R Sbjct: 217 CQIRGTFFVSHKYTNYSAVQDLHRR 241 >EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase 2A protein. Length = 535 Score = 21.4 bits (43), Expect = 5.0 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -3 Query: 387 CEIRGSLYPHRKLYTSMVVMDLQLR 313 C+IRG+ + K V DL R Sbjct: 224 CQIRGTFFVSHKYTNYSAVQDLHRR 248 >AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor candidate 49 protein. Length = 418 Score = 21.0 bits (42), Expect = 6.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -2 Query: 169 LHVRRELQLTGFLVQIYINVLPYFCVSKRSNFLYV*TVIFSR 44 +H+R + T LV IY L Y C +L V +FSR Sbjct: 301 IHIRSRQEDTDTLVVIYTFNLFYLCFC--FYWLLVMVAMFSR 340 >AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor candidate 14 protein. Length = 374 Score = 21.0 bits (42), Expect = 6.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -2 Query: 169 LHVRRELQLTGFLVQIYINVLPYFCVSKRSNFLYV*TVIFSR 44 +H+R + T LV IY L Y C +L V +FSR Sbjct: 257 IHIRSRQEDTDTLVVIYTFNLFYLCFC--FYWLLVMVAMFSR 296 >DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein. Length = 2700 Score = 20.6 bits (41), Expect = 8.7 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +3 Query: 126 WTRKPVSWSSRRT 164 WT KP +W S T Sbjct: 1035 WTTKPSTWWSSTT 1047 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 20.6 bits (41), Expect = 8.7 Identities = 7/25 (28%), Positives = 15/25 (60%) Frame = +2 Query: 281 IRNTFKLLFSTLNCKSITTIDVYSF 355 +RN F+L+ + LN ++ ++F Sbjct: 150 LRNDFRLMSNNLNKNNVVATGRFTF 174 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 127,522 Number of Sequences: 336 Number of extensions: 2782 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 12573240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -