Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305D04f
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.5  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 2   VIKSILILPNF*QN*MFLILFSCK**SDVIQLHIFIQHTKI 124
           V  S+L++ +   N   LIL +C+      ++HI + H  I
Sbjct: 42  VFYSVLMIISAIGNTTVLILITCRKRVSKSRIHIMLMHLAI 82


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 347 TKGICLSGCLLECPEFPICFSANFRISLIALGARFLNPTP 228
           T G+   G  L C E     +A   ++   +G+R  +P P
Sbjct: 379 TPGLDSDGIRLPCREVEAAATARNVVAPFLIGSRRTSPPP 418


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,359
Number of Sequences: 438
Number of extensions: 2300
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)