Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.7  

>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  DNLQYQFFPVSSGSVQFKVRAAND 142
           DNLQY F    SG++ + +    D
Sbjct: 201 DNLQYSFDNQCSGTIDWALPKQED 224


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 297 SPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 202
           SPP+ I   +++ +SG++   L   L  P+ P
Sbjct: 118 SPPMPITTDNVAAISGVLRSLLDRPLPAPERP 149


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 371 ISWSDPEPFPVYYV 412
           + WS P+  P YY+
Sbjct: 292 LMWSKPDLIPNYYI 305


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 71  DNLQYQFFPVSSGSVQF 121
           DNLQY F    SG++ +
Sbjct: 210 DNLQYSFDNQCSGTIDW 226


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 356 EAIPFISWSDPEPFPVY 406
           E +PF++     PFP Y
Sbjct: 352 ETLPFLNLQQQLPFPGY 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,174
Number of Sequences: 336
Number of extensions: 2799
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)